RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SPDYAQ5MJ70 313 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 DENND1BQ6P3S1 775 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CYB5D1Q6P9G0 228 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SPATA21Q7Z572 469 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CYP4X1Q8N118 509 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CXorf38Q8TB03 319 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 DENND1AQ8TEH3 1009 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 GTF3C2Q8WUA4 911 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 NCAPGQ9BPX3 1015 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 CTNNAL1Q9UBT7 734 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 SIX4Q9UIU6 781 aa11.3□□□□□ -0.6
CCDC172-201ENST00000333254 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
CCDC172-201ENST00000333254 A0A1B0GUA9 196 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 ASB14A6NK59 587 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 ZNF487B1APH4 448 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 RASA4BC9J798 803 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 RASA4O43374 803 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 C22orf31O95567 290 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 CREB1P16220 341 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 RFC1P35251 1148 aaPredicted RBP11.29□□□□□ -0.6
CCDC172-201ENST00000333254 PPIL2Q13356 520 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 KCTD2Q14681 263 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 HIF1AQ16665 826 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 WDR78Q5VTH9 848 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 KAZNQ674X7 775 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 RHPN2Q8IUC4 686 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
CCDC172-201ENST00000333254 NAT8LQ8N9F0 302 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 ATP11CQ8NB49 1132 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 ACTL9Q8TC94 416 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
CCDC172-201ENST00000333254 DHRS4Q9BTZ2 278 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 FRMD8Q9BZ67 464 aaPredicted RBP11.29□□□□□ -0.6
CCDC172-201ENST00000333254 RSAD1Q9HA92 442 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 KCNK9Q9NPC2 374 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 ERAP1Q9NZ08 941 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 PSMC3IPQ9P2W1 217 aaPredicted RBP11.29□□□□□ -0.6
CCDC172-201ENST00000333254 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC172-201ENST00000333254 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 C2CD2Q9Y426 696 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 KAT6AQ92794 2004 aa11.29□□□□□ -0.6
CCDC172-201ENST00000333254 FAM155BO75949 473 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 TAC1P20366 129 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ARL4CP56559 192 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 PSMC1P62191 440 aaKnown RBP11.28□□□□□ -0.6
CCDC172-201ENST00000333254 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
CCDC172-201ENST00000333254 MYO1EQ12965 1108 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 BNIP1Q12981 228 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 SPARCL1Q14515 664 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 SNCBQ16143 134 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 AMHR2Q16671 573 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 KLHL38Q2WGJ6 581 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 SCARA3Q6AZY7 606 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 TXNRD3NBQ6F5E7 133 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 RPAINQ86UA6 219 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 PARP9Q8IXQ6 854 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 SRRM1Q8IYB3 904 aaKnown RBP11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ANKRD13AQ8IZ07 590 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 LRRC71Q8N4P6 559 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ARFGAP1Q8N6T3 406 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ALKBH8Q96BT7 664 aaKnown RBP11.28□□□□□ -0.6
CCDC172-201ENST00000333254 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 PWWP2AQ96N64 755 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ACSS3Q9H6R3 686 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 RXFP1Q9HBX9 757 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 KLHL11Q9NVR0 708 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ASNSD1Q9NWL6 643 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ITGA11Q9UKX5 1188 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 ZNF236Q9UL36 1845 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
CCDC172-201ENST00000333254 INO80B-WBP1J3KQ70 363 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 SGK1O00141 431 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 DPYSL4O14531 572 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 SPAG6O75602 509 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 RNF8O76064 485 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 SETSIPP0DME0 302 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 CXCL8P10145 99 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 CD19P15391 556 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 IL1R2P27930 398 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 STIP1P31948 543 aaKnown RBP11.27□□□□□ -0.6
CCDC172-201ENST00000333254 SLC8A1P32418 973 aa11.27□□□□□ -0.6
CCDC172-201ENST00000333254 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.6
CCDC172-201ENST00000333254 ZNF143P52747 638 aaPredicted RBP11.27□□□□□ -0.6
CCDC172-201ENST00000333254 WDR4P57081 412 aaKnown RBP11.27□□□□□ -0.6
CCDC172-201ENST00000333254 TMED2Q15363 201 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms