RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 COPS5Q92905 334 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 PIK3R2O00459 728 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 ITGAVP06756 1048 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 KRT16P08779 473 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 CDH5P33151 784 aaPredicted RBP14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 COPS2P61201 443 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 LACTBP83111 547 aaPredicted RBP14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 TFDP1Q14186 410 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 MORF4L2Q15014 288 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 SH3PXD2AQ5TCZ1 1133 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 CDCA2Q69YH5 1023 aaPredicted RBP14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 PPP1R16BQ96T49 567 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 SIX4Q9UIU6 781 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 ACTL7BQ9Y614 415 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 SNCAIPQ9Y6H5 919 aa14.12□□□□□ -0.15
TUBA1B-201ENST00000332858 INO80B-WBP1J3KQ70 363 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 NQO1P15559 274 aaKnown RBP14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 CTCFP49711 727 aaPredicted RBP14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 EFNA5P52803 228 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 PREPLQ4J6C6 727 aaPredicted RBP14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 METTL7BQ6UX53 244 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 UNC45BQ8IWX7 931 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 CPT1BQ92523 772 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 INO80BQ9C086 356 aaPredicted RBP14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 PTPRHQ9HD43 1115 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 PCDHGC3Q9UN70 934 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 AGTPBP1Q9UPW5 1226 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 ERBB2P04626 1255 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 RDXP35241 583 aaKnown RBP14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 CLCN3P51790 818 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 PSMC1P62191 440 aaKnown RBP14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 NEDD9Q14511 834 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 ACCSLQ4AC99 568 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 WLSQ5T9L3 541 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 IER5Q5VY09 327 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 PPP1R21Q6ZMI0 780 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 NIPA2Q8N8Q9 360 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 RXFP1Q9HBX9 757 aa14.11□□□□□ -0.15
TUBA1B-201ENST00000332858 CEP350Q5VT06 3117 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 SOCS7O14512 581 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 NFICP08651 508 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 IL9RQ01113 521 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 FAM160B1Q5W0V3 765 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 APOBEC3FQ8IUX4 373 aaKnown RBP14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 KLHL29Q96CT2 875 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 GPR20Q99678 358 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 ZNF518BQ9C0D4 1074 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 SPATC1LQ9H0A9 340 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 SMYD3Q9H7B4 428 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 PCDH9Q9HC56 1237 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 METTL5Q9NRN9 209 aaKnown RBP14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 STK38LQ9Y2H1 464 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 MCM3APO60318 1980 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 SIGLEC16A6NMB1 481 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 CA4P22748 312 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 PROZP22891 400 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 KDELR1P24390 212 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 RPL22P35268 128 aaKnown RBP14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 AP3M2P53677 418 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 RAD23BP54727 409 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 DPH6Q7L8W6 267 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 CCHCR1Q8TD31 782 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 KLF6Q99612 283 aaPredicted RBP14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 KLHL14Q9P2G3 628 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 RABGEF1Q9UJ41 708 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 TMEM63AO94886 807 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 GSCP56915 257 aaPredicted RBP14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 HIF1AQ16665 826 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 ATF7IP2Q5U623 682 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 CENPUQ71F23 418 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 RIOX2Q8IUF8 465 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 C1orf127Q8N9H9 656 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 FAM71DQ8N9W8 422 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 SLC16A10Q8TF71 515 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 FGD4Q96M96 766 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 FOXP3Q9BZS1 431 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 PHTF1Q9UMS5 762 aa14.1□□□□□ -0.15
TUBA1B-201ENST00000332858 KAT6AQ92794 2004 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 IGKV6-21A0A0C4DH24 114 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 GOLGA8RI6L899 631 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 GPR25O00155 361 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 TYROBPO43914 113 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 KRT4P19013 534 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 PTPN7P35236 360 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 GRM1Q13255 1194 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 ZNF268Q14587 947 aaPredicted RBP14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 MPZL3Q6UWV2 235 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 NPNTQ6UXI9 565 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 XYLT1Q86Y38 959 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 TDRPQ86YL5 185 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 HSPH1Q92598 858 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 DDX56Q9NY93 547 aaKnown RBP14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 ANK1P16157 1881 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 TSHZ1Q6ZSZ6 1077 aa14.09□□□□□ -0.15
TUBA1B-201ENST00000332858 C3orf62Q6ZUJ4 267 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms