RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
C11orf88-201ENST00000332814 VSTM1Q6UX27 236 aa17.45■□□□□ 0.38
C11orf88-201ENST00000332814 DNAJB7Q7Z6W7 309 aaPredicted RBP17.45■□□□□ 0.38
C11orf88-201ENST00000332814 ITFG1Q8TB96 612 aa17.45■□□□□ 0.38
C11orf88-201ENST00000332814 SLITRK6Q9H5Y7 841 aa17.45■□□□□ 0.38
C11orf88-201ENST00000332814 IGSF9Q9P2J2 1179 aa17.45■□□□□ 0.38
C11orf88-201ENST00000332814 COQ4Q9Y3A0 265 aa17.45■□□□□ 0.38
C11orf88-201ENST00000332814 TRIM66O15016 1216 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 CEBPBP17676 345 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 KCNH2Q12809 1159 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 LRMPQ12912 555 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 PTPN21Q16825 1174 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 DDR2Q16832 855 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 SLC5A9Q2M3M2 681 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 ARHGAP15Q53QZ3 475 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 CAVIN1Q6NZI2 390 aaKnown RBP17.44■□□□□ 0.38
C11orf88-201ENST00000332814 MTSS1LQ765P7 747 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 ACOT1Q86TX2 421 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 NPAS3Q8IXF0 933 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 GPR152Q8TDT2 470 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 MCRS1Q96EZ8 462 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 NT5C1BQ96P26 610 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 NT5C1AQ9BXI3 368 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 ATXN3LQ9H3M9 355 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 MAGED2Q9UNF1 606 aaPredicted RBP17.44■□□□□ 0.38
C11orf88-201ENST00000332814 SORCS3Q9UPU3 1222 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 NME7Q9Y5B8 376 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 UNC80Q8N2C7 3258 aa17.44■□□□□ 0.38
C11orf88-201ENST00000332814 XIRP2A4UGR9 3374 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 A0A1W2PRU2 124 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 LRRN2O75325 713 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 MICAL2O94851 1124 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 ASGR2P07307 311 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 TBXAS1P24557 533 aaPredicted RBP17.43■□□□□ 0.38
C11orf88-201ENST00000332814 GABRR2P28476 465 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 CDC25CP30307 473 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 GPR15P49685 360 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 EPHA5P54756 1037 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 INCA1Q0VD86 236 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 ORC1Q13415 861 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 PRSS36Q5K4E3 855 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 SDHAF4Q5VUM1 108 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 NXPE3Q969Y0 559 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 FAM124BQ9H5Z6 455 aaPredicted RBP17.43■□□□□ 0.38
C11orf88-201ENST00000332814 GDE1Q9NZC3 331 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
C11orf88-201ENST00000332814 UXTQ9UBK9 157 aaPredicted RBP17.43■□□□□ 0.38
C11orf88-201ENST00000332814 SLC38A8A6NNN8 435 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 PMM2O15305 246 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 CILPO75339 1184 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 GJA1P17302 382 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 CUL2Q13617 745 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 TEAD2Q15562 447 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 FAM35AQ86V20 835 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 TMC8Q8IU68 726 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 PPM1KQ8N3J5 372 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 TATDN2Q93075 761 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 TCEAL4Q96EI5 215 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 SMARCD1Q96GM5 515 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 CEP295NLQ96MC4 621 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 ZNF518BQ9C0D4 1074 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 GPR88Q9GZN0 384 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 KCNK12Q9HB15 430 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 ZNF334Q9HCZ1 680 aaPredicted RBP17.42■□□□□ 0.38
C11orf88-201ENST00000332814 CISHQ9NSE2 258 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 FAM49BQ9NUQ9 324 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 TMEM63CQ9P1W3 806 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 HMGXB4Q9UGU5 601 aa17.42■□□□□ 0.38
C11orf88-201ENST00000332814 PI4K2BG5E9Z4 385 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 PES1O00541 588 aaKnown RBP17.41■□□□□ 0.38
C11orf88-201ENST00000332814 TPM2P07951 284 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 PRKCSHP14314 528 aaPredicted RBP17.41■□□□□ 0.38
C11orf88-201ENST00000332814 CCR2P41597 374 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 TDGQ13569 410 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 MAN2A1Q16706 1144 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 HSP90AA4PQ58FG1 418 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 UBALD2Q8IYN6 164 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 CRYBG2Q8N1P7 616 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 ENOX1Q8TC92 643 aaKnown RBP17.41■□□□□ 0.38
C11orf88-201ENST00000332814 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.38
C11orf88-201ENST00000332814 MED15Q96RN5 788 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 C1QTNF1Q9BXJ1 281 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 B3GNT5Q9BYG0 378 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 NAT10Q9H0A0 1025 aaKnown RBP17.41■□□□□ 0.38
C11orf88-201ENST00000332814 KRT82Q9NSB4 513 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 GCNT4Q9P109 453 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 NFE2L3Q9Y4A8 694 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 NUMBLQ9Y6R0 609 aa17.41■□□□□ 0.38
C11orf88-201ENST00000332814 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 F8VP50 259 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 CLDN5O00501 218 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 NOL4O94818 638 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 LETM1O95202 739 aaPredicted RBP17.4■□□□□ 0.38
C11orf88-201ENST00000332814 CCDC130P13994 396 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 ADORA2BP29275 332 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 KCNJ12Q14500 433 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 KLHL40Q2TBA0 621 aa17.4■□□□□ 0.38
C11orf88-201ENST00000332814 GPR158Q5T848 1215 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms