RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 PLA2G4AP47712 749 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CTCFP49711 727 aaPredicted RBP17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 GID8Q9NWU2 228 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 SUPT3HB4E1H0 165 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 MAN1A2O60476 641 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CYP11B1P15538 503 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CASP4P49662 377 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 MPZL3Q6UWV2 235 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 ERO1BQ86YB8 467 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 IL17RAQ96F46 866 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CCDC134Q9H6E4 229 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 WDCPQ9H6R7 721 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CCT8L1PA6NM43 557 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 ODC1P11926 461 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CHRM3P20309 590 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 SLC15A2Q16348 729 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 PKN3Q6P5Z2 889 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 ATP6V0D2Q8N8Y2 350 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 ITM2BQ9Y287 266 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 RPS6KL1Q9Y6S9 549 aa17.25■□□□□ 0.35
NSMCE3-201ENST00000332303 CLASP2O75122 1294 aaKnown RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SRP72O76094 671 aaKnown RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SLC26A2P50443 739 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 AASDHQ4L235 1098 aaPredicted RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ARID3BQ8IVW6 561 aaPredicted RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 CERKQ8TCT0 537 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 PMPCBO75439 489 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SGPL1O95470 568 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 WASHC5Q12768 1159 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 TRIP10Q15642 601 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 RNF180Q86T96 592 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 VPS37AQ8NEZ2 397 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 RFWD2Q8NHY2 731 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 MTMR12Q9C0I1 747 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ADCY3O60266 1144 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 CLCN3P51790 818 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 MROH8Q9H579 483 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 RIOX1Q9H6W3 641 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 TMEM161AQ9NX61 479 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ABI2Q9NYB9 513 aaPredicted RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SFMBT1Q9UHJ3 866 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 HNRNPRO43390 633 aaKnown RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 AP1G2O75843 785 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SERPIND1P05546 499 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 MMP14P50281 582 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 MCL1Q07820 350 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 LRRC74AQ0VAA2 488 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 PDK2Q15119 407 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SKIV2LQ15477 1246 aaKnown RBP17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 SEZ6Q53EL9 994 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 WDR93Q6P2C0 686 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ZNF720Q7Z2F6 126 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 CLEC4FQ8N1N0 589 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ARMC2Q8NEN0 867 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 ADNPQ9H2P0 1102 aa17.24■□□□□ 0.35
NSMCE3-201ENST00000332303 LOC100653049A0A140TA62 436 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 C17orf102A2RUQ5 167 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 KRT34O76011 436 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 TGM2P21980 687 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 KLC1Q07866 573 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 DMC1Q14565 340 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 CHI3L2Q15782 390 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 GLRA4Q5JXX5 417 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 C4orf19Q8IY42 314 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 ZNF555Q8NEP9 628 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 RHOBTB1O94844 696 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 GEMP55040 296 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 DNAJC3Q13217 504 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 RBM43Q6ZSC3 357 aaKnown RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 STX19Q8N4C7 294 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 TMEM169Q96HH4 297 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 RPRD1AQ96P16 312 aaPredicted RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 CAPN6Q9Y6Q1 641 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 SEC24DO94855 1032 aaPredicted RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 APOA1P02647 267 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 GYS1P13807 737 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 PTGISQ16647 500 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 TTLL9Q3SXZ7 439 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 TFDP3Q5H9I0 405 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 TDRD10Q5VZ19 366 aaKnown RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 MRNIPQ6NTE8 343 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 USP13Q92995 863 aaPredicted RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 CGRRF1Q99675 332 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 OLFML3Q9NRN5 406 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 SOAT2O75908 522 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 HSPA1AP0DMV8 641 aaKnown RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 HSPA1BP0DMV9 641 aaKnown RBP17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 RARGP13631 454 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 ATICP31939 592 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 SERPINB10P48595 397 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 SLC11A2P49281 568 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 LRRC36Q1X8D7 754 aa17.23■□□□□ 0.35
NSMCE3-201ENST00000332303 ZRANB3Q5FWF4 1079 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms