RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ETS1P14921 441 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 NOP14P78316 857 aaKnown RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 MORF4L2Q15014 288 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 RIPOR1Q6ZS17 1223 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 NET1Q7Z628 596 aaPredicted RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 TRIM74Q86UV6 250 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 TRIM73Q86UV7 250 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 LCA5Q86VQ0 697 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 MYLK4Q86YV6 388 aaPredicted RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 C12orf56Q8IXR9 622 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 ST13P4Q8IZP2 240 aaPredicted RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 STKLD1Q8NE28 680 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 TMEM206Q9H813 350 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 ARMCX1Q9P291 453 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 DNPEPQ9ULA0 475 aa19■□□□□ 0.63
CLSTN3-202ENST00000331148 G3BP2Q9UN86 482 aaKnown RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 ZNFX1Q9P2E3 1918 aaKnown RBP19■□□□□ 0.63
CLSTN3-202ENST00000331148 NFASCO94856 1347 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 RNASEH1O60930 286 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 BANF1O75531 89 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 SPATA31D3P0C874 917 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 GJC1P36383 396 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 ARL4CP56559 192 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 EAPPQ56P03 285 aaPredicted RBP18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 SPATA31D4Q6ZUB0 917 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 ANKMY2Q8IV38 441 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 MZB1Q8WU39 189 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 TMEM174Q8WUU8 243 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 LPAR1Q92633 364 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 PPP2R3CQ969Q6 453 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 NMUR2Q9GZQ4 415 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 RABGEF1Q9UJ41 708 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 CLUHO75153 1309 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 GOLGA8RI6L899 631 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 ADRB2P07550 413 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 UNGP13051 313 aaPredicted RBP18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 TRMT5Q32P41 509 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 RNASEH2BQ5TBB1 312 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 PANX3Q96QZ0 392 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 KLF6Q99612 283 aaPredicted RBP18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 FETUBQ9UGM5 382 aa18.99■□□□□ 0.63
CLSTN3-202ENST00000331148 ARHGEF35A5YM69 484 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 B2RBV5 119 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 H3BRJ5 948 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ATP2A1O14983 1001 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 CIB2O75838 187 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 MYL2P10916 166 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 AP2B1P63010 937 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 MYBPC3Q14896 1274 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 PRKD1Q15139 912 aaPredicted RBP18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ALLCQ8N6M5 410 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 EXD1Q8NHP7 514 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 FBXO27Q8NI29 283 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 SPIRE2Q8WWL2 714 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ACCSQ96QU6 501 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 PAFAH2Q99487 392 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 DNAJB4Q9UDY4 337 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ZNF148Q9UQR1 794 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 WDR46O15213 610 aaKnown RBP18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ERFP50548 548 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 C2CD6Q53TS8 623 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 C9orf131Q5VYM1 1079 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ADGRD1Q6QNK2 874 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ACAD11Q709F0 780 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ALYREFQ86V81 257 aaKnown RBP18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 TMPRSS6Q8IU80 811 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 SCUBE1Q8IWY4 988 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 NAT14Q8WUY8 206 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 CPA5Q8WXQ8 436 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 ALKBH8Q96BT7 664 aaKnown RBP18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 TRIM11Q96F44 468 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 NT5C1BQ96P26 610 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 WRNIP1Q96S55 665 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 DHRS4Q9BTZ2 278 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 FBXO28Q9NVF7 368 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 SHOC2Q9UQ13 582 aa18.98■□□□□ 0.63
CLSTN3-202ENST00000331148 USP1O94782 785 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 KRT5P13647 590 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 GLRA2P23416 452 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 SH3BGRP55822 239 aaPredicted RBP18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 ACTR3P61158 418 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 TFDP1Q14186 410 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 C6orf163Q5TEZ5 329 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 CCDC174Q6PII3 467 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 CHSY1Q86X52 802 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 RBM15BQ8NDT2 890 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 ELMO3Q96BJ8 720 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 TTC1Q99614 292 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 EBF3Q9H4W6 596 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 PREBQ9HCU5 417 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 PPM1HQ9ULR3 514 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 PLA2G4CQ9UP65 541 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 GOLGA8IPA6NC78 632 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 GOLGA8JA6NMD2 632 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 PIAS1O75925 651 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 BAG2O95816 211 aa18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 PABPC4LP0CB38 370 aaKnown RBP18.97■□□□□ 0.63
CLSTN3-202ENST00000331148 DHRS4L1P0CG22 281 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms