RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 UCHL3P15374 230 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 EDRF1Q3B7T1 1238 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 LVRNQ6Q4G3 990 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 TFR2Q9UP52 801 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 ACTN3Q08043 901 aaPredicted RBP16.04■□□□□ 0.16
PTPN21-201ENST00000328736 CCL15Q16663 113 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 HHIPL2Q6UWX4 724 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 HOMEZQ8IX15 550 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 DTX3LQ8TDB6 740 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 IGDCC4Q8TDY8 1250 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 RPS6KB2Q9UBS0 482 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 HOXA2O43364 376 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 RASSF9O75901 435 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 CLK1P49759 484 aaKnown RBP16.04■□□□□ 0.16
PTPN21-201ENST00000328736 ERFP50548 548 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 GPAT2Q6NUI2 795 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 HPDLQ96IR7 371 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 RIT2Q99578 217 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 TBC1D23Q9NUY8 699 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 SATB2Q9UPW6 733 aa16.04■□□□□ 0.16
PTPN21-201ENST00000328736 TRIM51Q9BSJ1 452 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 LRRC1Q9BTT6 524 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 FRMD8P1Q9BZ68 369 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 OSBPL8Q9BZF1 889 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 GRAP2O75791 330 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 GUCY1A3Q02108 690 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 CYP4A22Q5TCH4 519 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 GJD4Q96KN9 370 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 CNBD2Q96M20 576 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 UBQLN1Q9UMX0 589 aaKnown RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 F5H5T6 163 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 M0R3G1 203 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 PTPN7P35236 360 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 C3orf62Q6ZUJ4 267 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 FAM9CQ8IZT9 166 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 ECSITQ9BQ95 431 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 EPB41L4AQ9HCS5 686 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 AGPAT5Q9NUQ2 364 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 CHI3L1P36222 383 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 MAGEA4P43358 317 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 SLC16A1P53985 500 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 TRIM71Q2Q1W2 868 aaKnown RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 AGAP9Q5VTM2 703 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 CAPRIN2Q6IMN6 1127 aaKnown RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 LINC00116Q8NCU8 138 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 UBA3Q8TBC4 463 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 FEZF2Q8TBJ5 459 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 RIN2Q8WYP3 895 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 GPR182O15218 404 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 RHOBTB3O94955 611 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 GTF2H1P32780 548 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 TIGD7Q6NT04 549 aaPredicted RBP16.03■□□□□ 0.16
PTPN21-201ENST00000328736 MRNIPQ6NTE8 343 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 FAR2Q96K12 515 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 HPS4Q9NQG7 708 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
PTPN21-201ENST00000328736 TK2O00142 265 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ASS1P00966 412 aaKnown RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 USP49Q70CQ1 688 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 RRM2P31350 389 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 HSPA13P48723 471 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ANGEL2Q5VTE6 544 aaKnown RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 PLA2G4FQ68DD2 849 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 C4orf33Q8N1A6 199 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 FAM151AQ8WW52 585 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 DTNBP1Q96EV8 351 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 MKNK1Q9BUB5 465 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ZCWPW1Q9H0M4 648 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 MARCOQ9UEW3 520 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 E9PCH4 1651 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ANTXR2P58335 489 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ELOA2Q8IYF1 753 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 WDCPQ9H6R7 721 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 SCUBE2Q9NQ36 999 aa16.02■□□□□ 0.16
PTPN21-201ENST00000328736 ABI2Q9NYB9 513 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-201ENST00000328736 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.15
PTPN21-201ENST00000328736 DPYDQ12882 1025 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 ZC2HC1CQ53FD0 456 aaPredicted RBP16.02■□□□□ 0.15
PTPN21-201ENST00000328736 ADSSL1Q8N142 457 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 RNF112Q9ULX5 631 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 ZNF711Q9Y462 761 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 UBE2Q2LH0YL09 131 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 HNRNPCP07910 306 aaKnown RBP eCLIP16.02■□□□□ 0.15
PTPN21-201ENST00000328736 CCDC92Q53HC0 331 aaPredicted RBP16.02■□□□□ 0.15
PTPN21-201ENST00000328736 FAM180AQ6UWF9 173 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 CD302Q8IX05 232 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 CCDC126Q96EE4 140 aa16.02■□□□□ 0.15
PTPN21-201ENST00000328736 CAPN10Q9HC96 672 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms