RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ATN1P54259 1190 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 FBXW10Q5XX13 1052 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 ZNF473Q8WTR7 871 aaKnown RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 EXT2Q93063 718 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 C18orf25Q96B23 403 aaPredicted RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 NEUROG2Q9H2A3 272 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 ABHD16BQ9H3Z7 469 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 APOBEC3GQ9HC16 384 aaKnown RBP16.8■□□□□ 0.28
SYNM-201ENST00000328642 DMAC2Q9NW81 257 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 MYO7AQ13402 2215 aa16.8■□□□□ 0.28
SYNM-201ENST00000328642 GPR25O00155 361 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 APOL1O14791 398 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 GRIK1P39086 918 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 MAP3K7CLP57077 242 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 MMRN1Q13201 1228 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 PDZD4Q76G19 769 aaPredicted RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 TTC13Q8NBP0 860 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 PGBD4Q96DM1 585 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 TNIP3Q96KP6 325 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 GAD1Q99259 594 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 B3GNT5Q9BYG0 378 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 UBP1Q9NZI7 540 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 R3HDM2Q9Y2K5 976 aaKnown RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 A0A0B4J269 797 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 M0QYT0 321 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 NFIL3Q16649 462 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 TRABDQ9H4I3 376 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 USP18Q9UMW8 372 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 PLCH1Q4KWH8 1693 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 NDC80O14777 642 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 RGS20O76081 388 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 PPIL2Q13356 520 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 TTMPQ5BVD1 217 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 NPNTQ6UXI9 565 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 CHMP6Q96FZ7 201 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 TPX2Q9ULW0 747 aaKnown RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 ARHGAP42A6NI28 874 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 MICAL2O94851 1124 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 CPB1P15086 417 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 MAMLD1Q13495 774 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 ASTE1Q2TB18 679 aaPredicted RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 C6orf163Q5TEZ5 329 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 C11orf63Q6NUN7 778 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 CCDC62Q6P9F0 684 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 JOSD2Q8TAC2 188 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 RAPGEF5Q92565 580 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 CDKL2Q92772 493 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 NXF3Q9H4D5 531 aaKnown RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 MINDY3Q9H8M7 445 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 CNOT10Q9H9A5 744 aaKnown RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 ZFYVE28Q9HCC9 887 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 DDX56Q9NY93 547 aaKnown RBP16.79■□□□□ 0.28
SYNM-201ENST00000328642 ARHGAP28Q9P2N2 729 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
SYNM-201ENST00000328642 H0Y3Z8 333 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 CYB561D2O14569 222 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 SSTR1P30872 391 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 TMPRSS15P98073 1019 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 DNAJC3Q13217 504 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 PPP1R2P3Q6NXS1 205 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 SPOCD1Q6ZMY3 1216 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 ABI2Q9NYB9 513 aaPredicted RBP16.78■□□□□ 0.28
SYNM-201ENST00000328642 TJP2Q9UDY2 1190 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 STAP1Q9ULZ2 295 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 A0A087WUV0 522 aaPredicted RBP16.78■□□□□ 0.28
SYNM-201ENST00000328642 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 SPDYE5A6NIY4 337 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 NOVP48745 357 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 DEUP1Q05D60 604 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 ZNF844Q08AG5 666 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 TMC3Q7Z5M5 1100 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 RNF135Q8IUD6 432 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 COPEO14579 308 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 ACTN3Q08043 901 aaPredicted RBP16.78■□□□□ 0.28
SYNM-201ENST00000328642 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 PGLYRP2Q96PD5 576 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 DHX33Q9H6R0 707 aaKnown RBP16.78■□□□□ 0.28
SYNM-201ENST00000328642 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
SYNM-201ENST00000328642 DDIT4Q9NX09 232 aa16.78■□□□□ 0.28
SYNM-201ENST00000328642 MIPP30301 263 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 TAF6P49848 677 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 OVGP1Q12889 678 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 EFHC2Q5JST6 749 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 SCAMP3O14828 347 aaKnown RBP16.77■□□□□ 0.28
SYNM-201ENST00000328642 ZC3H11AO75152 810 aaKnown RBP eCLIP16.77■□□□□ 0.28
SYNM-201ENST00000328642 AP1G2O75843 785 aa16.77■□□□□ 0.28
SYNM-201ENST00000328642 LYPLA2O95372 231 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms