RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 SCN4BQ8IWT1 228 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 SPATA18Q8TC71 538 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 SCFD1Q8WVM8 642 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 MRPS31Q92665 395 aaKnown RBP15.14■□□□□ 0.01
RPAIN-201ENST00000327154 USP13Q92995 863 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-201ENST00000327154 IER2Q9BTL4 223 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 FAM126AQ9BYI3 521 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-201ENST00000327154 FAM13BQ9NYF5 915 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 ZMYM5Q9UJ78 669 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 CCL26Q9Y258 94 aa15.14■□□□□ 0.01
RPAIN-201ENST00000327154 TSC2P49815 1807 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-201ENST00000327154 PDGFRBP09619 1106 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 TDGF1P13385 188 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 TNNI1P19237 187 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 DDX6P26196 483 aaKnown RBP eCLIP15.13■□□□□ 0.01
RPAIN-201ENST00000327154 NRLP54845 237 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 SATB1Q01826 763 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 EHHADHQ08426 723 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 LRRC32Q14392 662 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 ITPRIPL2Q3MIP1 535 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 RESP18Q5W5W9 173 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 LIMS2Q7Z4I7 341 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 SPEM1Q8N4L4 309 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 KBTBD7Q8WVZ9 684 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 CCDC127Q96BQ5 260 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 FAM83CQ9BQN1 747 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 MAGEF1Q9HAY2 307 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 SLC39A2Q9NP94 309 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 TDP1Q9NUW8 608 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 NCDNQ9UBB6 729 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 UXTQ9UBK9 157 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-201ENST00000327154 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
RPAIN-201ENST00000327154 PVALEFA0A1B0GWK0 134 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 SOBPA7XYQ1 873 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 NOL4O94818 638 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 PSMC1P62191 440 aaKnown RBP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 SNRPFP62306 86 aaKnown RBP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 DNM1Q05193 864 aaKnown RBP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 CYP24A1Q07973 514 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 CUL4BQ13620 913 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 PSMD6Q15008 389 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 CFAP221Q4G0U5 840 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 DGKKQ5KSL6 1271 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 ATL3Q6DD88 541 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 Q6ZS52 159 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 HS2ST1Q7LGA3 356 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 GRAMD1CQ8IYS0 662 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 XXYLT1Q8NBI6 393 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 TRMT2BQ96GJ1 504 aaKnown RBP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 FUBP3Q96I24 572 aaKnown RBP eCLIP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 MYRFLQ96LU7 910 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 CYP2S1Q96SQ9 504 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 SYT15Q9BQS2 421 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 EPC1Q9H2F5 836 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 EBF3Q9H4W6 596 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 CRTAC1Q9NQ79 661 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 MAGEC2Q9UBF1 373 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 CDH9Q9ULB4 789 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 SMG5Q9UPR3 1016 aaKnown RBP15.12■□□□□ 0.01
RPAIN-201ENST00000327154 SPTBN4Q9H254 2564 aa15.12■□□□□ 0.01
RPAIN-201ENST00000327154 TICRRQ7Z2Z1 1910 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 OTOL1A6NHN0 477 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-201ENST00000327154 WARSP23381 471 aaKnown RBP15.11■□□□□ 0.01
RPAIN-201ENST00000327154 GNL1P36915 607 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-201ENST00000327154 RUNX3Q13761 415 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 TRIM68Q6AZZ1 485 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 CC2D1AQ6P1N0 951 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-201ENST00000327154 C4orf50Q6ZRC1 276 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 TTC16Q8NEE8 873 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 ZNF516Q92618 1163 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 RMDN1Q96DB5 314 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 CGRRF1Q99675 332 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 MRPL45Q9BRJ2 306 aaKnown RBP15.11■□□□□ 0.01
RPAIN-201ENST00000327154 TRPC7Q9HCX4 862 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 HPS4Q9NQG7 708 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 RCOR1Q9UKL0 485 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 ZNF292O60281 2723 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 COL4A2P08572 1712 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 UBE4BO95155 1302 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 GPR179Q6PRD1 2367 aa15.11■□□□□ 0.01
RPAIN-201ENST00000327154 TADA3O75528 432 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 BDNFP23560 247 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 GRIK1P39086 918 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 MAGEA11P43364 429 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 FOXK2Q01167 660 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 CYP27A1Q02318 531 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 DMWDQ09019 674 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 CCINQ13939 588 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 KNOP1Q1ED39 458 aaKnown RBP15.1■□□□□ 0.01
RPAIN-201ENST00000327154 BMT2Q1RMZ1 405 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 WDR72Q3MJ13 1102 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 CEP57L1Q8IYX8 460 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 RIN3Q8TB24 985 aa15.1■□□□□ 0.01
RPAIN-201ENST00000327154 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
RPAIN-201ENST00000327154 MYLPFQ96A32 169 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms