RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 NLRP11P59045 1033 aaKnown RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 BASP1P80723 227 aaKnown RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 OTUD4Q01804 1114 aaKnown RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 BIRC2Q13490 618 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 ACSBG2Q5FVE4 666 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 BANPQ8N9N5 519 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 CFAP61Q8NHU2 1237 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 ACTL9Q8TC94 416 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 FAM111AQ96PZ2 611 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 GLIS2Q9BZE0 524 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 ZWILCHQ9H900 591 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 TUBP50607 506 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 RPS6P62753 249 aaKnown RBP15.32■□□□□ 0.04
SSBP3-201ENST00000326956 PTK7Q13308 1070 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 PGM5Q15124 567 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 C11orf91Q3C1V1 193 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 FNBP1LQ5T0N5 605 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 TTC13Q8NBP0 860 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 TMEM35BQ8NCS4 154 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 CLEC4DQ8WXI8 215 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 POLR3FQ9H1D9 316 aaPredicted RBP15.32■□□□□ 0.04
SSBP3-201ENST00000326956 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
SSBP3-201ENST00000326956 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
SSBP3-201ENST00000326956 SNUPNO95149 360 aaKnown RBP15.32■□□□□ 0.04
SSBP3-201ENST00000326956 ABCD1P33897 745 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 CDKN2BP42772 138 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 PTGER2P43116 358 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 OCRLQ01968 901 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 GAD2Q05329 585 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 ZC3H12AQ5D1E8 599 aaKnown RBP15.32■□□□□ 0.04
SSBP3-201ENST00000326956 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 ANKRD22Q5VYY1 191 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 UCMAQ8WVF2 138 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 CPT1BQ92523 772 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 C10orf88Q9H8K7 445 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
SSBP3-201ENST00000326956 I3L4J1 428 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 CST8O60676 142 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 MYL2P10916 166 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 KCNA3P22001 575 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 YWHAGP61981 247 aaKnown RBP eCLIP15.31■□□□□ 0.04
SSBP3-201ENST00000326956 THOC5Q13769 683 aaKnown RBP15.31■□□□□ 0.04
SSBP3-201ENST00000326956 TXNRD3NBQ6F5E7 133 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 CIAPIN1Q6FI81 312 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 PTCD3Q96EY7 689 aaKnown RBP15.31■□□□□ 0.04
SSBP3-201ENST00000326956 FAM161BQ96MY7 647 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 XPO7Q9UIA9 1087 aaKnown RBP15.31■□□□□ 0.04
SSBP3-201ENST00000326956 CHMP2BQ9UQN3 213 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 SLX4Q8IY92 1834 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 CIB2O75838 187 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 STAM2O75886 525 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 VNN1O95497 513 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 HARSP12081 509 aaKnown RBP15.31■□□□□ 0.04
SSBP3-201ENST00000326956 BGNP21810 368 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 TAP1Q03518 808 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
SSBP3-201ENST00000326956 CCDC142Q17RM4 750 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 MSS51Q4VC12 460 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 SWSAP1Q6NVH7 229 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 RINLQ6ZS11 566 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 CCDC110Q8TBZ0 833 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 PTPRN2Q92932 1015 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF341Q9BYN7 854 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 TAS2R1Q9NYW7 299 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 ANGPTL2Q9UKU9 493 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 C2CD2Q9Y426 696 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 NUB1Q9Y5A7 615 aa15.31■□□□□ 0.04
SSBP3-201ENST00000326956 FCHO1O14526 889 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 TBX10O75333 385 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 PSMA2P25787 234 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 POLE2P56282 527 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 DLGAP5Q15398 846 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF394Q53GI3 561 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 RFX8Q6ZV50 586 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 SLC35B2Q8TB61 432 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 OXNAD1Q96HP4 312 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 MSTO1Q9BUK6 570 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 MMADHCQ9H3L0 296 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 NUMBLQ9Y6R0 609 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 TGDSO95455 350 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 LDHAP00338 332 aaKnown RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 GSTA2P09210 222 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 NCOA4Q13772 614 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 SMTNL2Q2TAL5 461 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 MFN1Q8IWA4 741 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 DCAKDQ8WVC6 231 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 APOPT1Q96IL0 206 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 PDCD2LQ9BRP1 358 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 TRIM4Q9C037 500 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 STX18Q9P2W9 335 aaKnown RBP15.3■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF212Q9UDV6 495 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 MAGEA13PA6NCF6 341 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 B2RBV5 119 aa15.3■□□□□ 0.04
SSBP3-201ENST00000326956 COPEO14579 308 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms