RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 MSS51Q4VC12 460 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 LRRC6Q86X45 466 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
NLRC3-201ENST00000324659 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 DENND1AQ8TEH3 1009 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 CYP39A1Q9NYL5 469 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 NUB1Q9Y5A7 615 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 VNN1O95497 513 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 TPBGLP0DKB5 382 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 GTF2H1P32780 548 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 HIF1AQ16665 826 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 DNAJC24Q6P3W2 148 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 TAS1R3Q7RTX0 852 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 ANKRD31Q8N7Z5 1873 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 TCP10LQ8TDR4 215 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 TTC17Q96AE7 1141 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 ST6GALNAC4Q9H4F1 302 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
NLRC3-201ENST00000324659 PSMC3IPQ9P2W1 217 aaPredicted RBP12.66□□□□□ -0.38
NLRC3-201ENST00000324659 AGO2Q9UKV8 859 aaKnown RBP12.66□□□□□ -0.38
NLRC3-201ENST00000324659 ACTL7BQ9Y614 415 aa12.66□□□□□ -0.38
NLRC3-201ENST00000324659 GLRA2P23416 452 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 BPIFB4P59827 614 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 OGDHQ02218 1023 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 EAPPQ56P03 285 aaPredicted RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 SPOCD1Q6ZMY3 1216 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 CDR2LQ86X02 465 aaPredicted RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 SCYL3Q8IZE3 742 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 PARVAQ9NVD7 372 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 ZNF541Q9H0D2 1346 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 PMM2O15305 246 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 PFDN1O60925 122 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 YY1P25490 414 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 TPP2P29144 1249 aaPredicted RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 SKIV2L2P42285 1042 aaKnown RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 BASP1P80723 227 aaKnown RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 FNBP1LQ5T0N5 605 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 ENOSF1Q7L5Y1 443 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 ALLCQ8N6M5 410 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 GMLQ99445 158 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 PAFAH2Q99487 392 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 TARS2Q9BW92 718 aaKnown RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 HEY2Q9UBP5 337 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 SMG5Q9UPR3 1016 aaKnown RBP12.65□□□□□ -0.38
NLRC3-201ENST00000324659 LRRC42Q9Y546 428 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
NLRC3-201ENST00000324659 NPTXRO95502 500 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 GPX6P59796 221 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 DEUP1Q05D60 604 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 ZNF252P-AS1Q0IIN9 211 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 CCDC15Q0P6D6 951 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 ORC1Q13415 861 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 KHDC1Q4VXA5 237 aaKnown RBP12.65□□□□□ -0.39
NLRC3-201ENST00000324659 DSTYKQ6XUX3 929 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 FAM83AQ86UY5 434 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 PALM2Q8IXS6 379 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 RIBC1Q8N443 379 aaPredicted RBP12.65□□□□□ -0.39
NLRC3-201ENST00000324659 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 PTPRN2Q92932 1015 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 FBXL18Q96ME1 805 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 PCSK1NQ9UHG2 260 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 CHMP2BQ9UQN3 213 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 SCINQ9Y6U3 715 aa12.65□□□□□ -0.39
NLRC3-201ENST00000324659 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 TROVE2P10155 538 aaKnown RBP eCLIP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 GSTT1P30711 240 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 PTGER2P43116 358 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 JAK3P52333 1124 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 IGBP1P78318 339 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 LMNB2Q03252 620 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 ZACNQ401N2 412 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 FBXO36Q8NEA4 188 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 ZNF606Q8WXB4 792 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 TTC25Q96NG3 672 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 MIPEPQ99797 713 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 MOV10L1Q9BXT6 1211 aaKnown RBP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 ARMCX1Q9P291 453 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 IP6K2Q9UHH9 426 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 MYH9P35579 1960 aaKnown RBP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 ABHD2P08910 425 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 WEE2P0C1S8 567 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 SRGAP2CP0DJJ0 459 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 CCND2P30279 289 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 PRKCEQ02156 737 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 NR1H3Q13133 447 aa12.64□□□□□ -0.39
NLRC3-201ENST00000324659 RNASEH2BQ5TBB1 312 aaKnown RBP12.64□□□□□ -0.39
NLRC3-201ENST00000324659 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms