RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CATIPQ7Z7H3 387 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 DGKHQ86XP1 1220 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 PTRH1Q86Y79 214 aaKnown RBP7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CCDC33Q8N5R6 958 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 DEFB119Q8N690 84 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 ZSCAN1Q8NBB4 408 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 BRF1Q92994 677 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 LURAP1Q96LR2 239 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 POLR3CQ9BUI4 534 aaPredicted RBP7.27□□□□□ -1.25
CSTF3-201ENST00000323959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CYP4F11Q9HBI6 524 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CEP72Q9P209 647 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CCDC196A0A1B0GTZ2 297 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 H7C4K7 107 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 VPS4BO75351 444 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 PRKCGP05129 697 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 IFNAR1P17181 557 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 GJA1P17302 382 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 MLH1P40692 756 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CLDN6P56747 220 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 GSE1Q14687 1217 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 PCBP1Q15365 356 aaKnown RBP eCLIP7.27□□□□□ -1.25
CSTF3-201ENST00000323959 PROX2Q3B8N5 592 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 GPR158Q5T848 1215 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 APOA5Q6Q788 366 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 HEATR4Q86WZ0 1026 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CPVLQ9H3G5 476 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 AFF4Q9UHB7 1163 aaKnown RBP7.27□□□□□ -1.25
CSTF3-201ENST00000323959 VPS4AQ9UN37 437 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 TRIM66O15016 1216 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 PPP1R11O60927 126 aaPredicted RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 KLF8O95600 359 aaPredicted RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 CPA1P15085 419 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 DDX6P26196 483 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 AXLP30530 894 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 CDR1P51861 262 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 ZNF445P59923 1031 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 TWF1Q12792 350 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 RESTQ13127 1097 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 ZSCAN23Q3MJ62 389 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 PPP1R26Q5T8A7 1209 aaPredicted RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 CC2D1AQ6P1N0 951 aaPredicted RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 C12orf40Q86WS4 652 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 SMG8Q8ND04 991 aaKnown RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 WASF1Q92558 559 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 ATP2A3Q93084 1043 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 EBF3Q9H4W6 596 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 ECT2Q9H8V3 914 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 CALCOCO1Q9P1Z2 691 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 ZSWIM5Q9P217 1185 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 BRPF3Q9ULD4 1205 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 PCDHGA8Q9Y5G5 932 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 NAV3Q8IVL0 2385 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 PRAMEF12O95522 483 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 SV2AQ7L0J3 742 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 BRAPQ7Z569 592 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 MIOSQ9NXC5 875 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 MAFBQ9Y5Q3 323 aaPredicted RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 SVILO95425 2214 aa7.26□□□□□ -1.25
CSTF3-201ENST00000323959 ARHGEF17Q96PE2 2063 aaPredicted RBP7.26□□□□□ -1.25
CSTF3-201ENST00000323959 A0A1W2PRU2 124 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 TRAK2O60296 914 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 C4BPAP04003 597 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 RNF224P0DH78 156 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 FDPSP14324 419 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 ARSAP15289 507 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 ACP1P24666 158 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 HDAC4P56524 1084 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 EMC10Q5UCC4 262 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 METTL3Q86U44 580 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 ZSCAN10Q96SZ4 725 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 LZTS2Q9BRK4 669 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 RNF26Q9BY78 433 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 IPPQ9Y573 584 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 CDRT15L2A8MXV6 281 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 SGK1O00141 431 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 KIF4AO95239 1232 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 SEC24AO95486 1093 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 GABRG2P18507 467 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 ATP4AP20648 1035 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 TNFRSF4P43489 277 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 GRIA4P48058 902 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 AFF3P51826 1226 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 ORC1Q13415 861 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 PKP1Q13835 747 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 CLCA4Q14CN2 919 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 SRGAP1Q7Z6B7 1085 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 IL17RCQ8NAC3 791 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 TXNDC5Q8NBS9 432 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 GCNAQ96QF7 691 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 SCAND2PQ9GZW5 306 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 OTOL1A6NHN0 477 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 TRAPPC3O43617 180 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 MARCH6O60337 910 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 LETM1O95202 739 aaPredicted RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 CKMT2P17540 419 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 EIF2DP41214 584 aaKnown RBP7.25□□□□□ -1.25
CSTF3-201ENST00000323959 EPHB3P54753 998 aa7.25□□□□□ -1.25
CSTF3-201ENST00000323959 SEC13P55735 322 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms