RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CEP44Q9C0F1 390 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 HDHD2Q9H0R4 259 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 SLC39A10Q9ULF5 831 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 PDS5AQ29RF7 1337 aaKnown RBP17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 IL18RAPO95256 599 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 CYBBP04839 570 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 AKR1B1P15121 316 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 FDFT1P37268 417 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 SEC24CP53992 1094 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 DDR2Q16832 855 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 EDRF1Q3B7T1 1238 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 KRT77Q7Z794 578 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 NLRP1Q9C000 1473 aa17.52■□□□□ 0.39
SMCHD1-201ENST00000320876 TGM2P21980 687 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 TNFAIP8O95379 198 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 ACADSBP45954 432 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 SEL1L3Q68CR1 1132 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 LRRC49Q8IUZ0 686 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 SIRT2Q8IXJ6 389 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 HPS4Q9NQG7 708 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 ZNF521Q96K83 1311 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 CNOT3O75175 753 aaKnown RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 OTOAQ7RTW8 1153 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 APOL5Q9BWW9 433 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 ENOPH1Q9UHY7 261 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 SNPHO15079 494 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 NMT2O60551 498 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 FKBP6O75344 327 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 OTUD4Q01804 1114 aaKnown RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 VTA1Q9NP79 307 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 TMCC3Q9ULS5 477 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 USP6P35125 1406 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 PDGFRAP16234 1089 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 GRAPQ13588 217 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 USP39Q53GS9 565 aaKnown RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 ARHGAP22Q7Z5H3 698 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 GRAPLQ8TC17 118 aaPredicted RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 PCSK7Q16549 785 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 SGO1Q5FBB7 561 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 RIN2Q8WYP3 895 aaPredicted RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 TAGLN3Q9UI15 199 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 ALDH1A1P00352 501 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 TSNQ15631 228 aaKnown RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 GALNTL6Q49A17 601 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 RSBN1Q5VWQ0 802 aaPredicted RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 LAYNQ6UX15 382 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 LRRC6Q86X45 466 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 MRPL39Q9NYK5 338 aaKnown RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 KLHL3Q9UH77 587 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
SMCHD1-201ENST00000320876 FAM58BPP0C7Q3 252 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 ALX1Q15699 326 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 CROCCP3Q8IVE0 287 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 RBBP8NLQ8NC74 664 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 ERAP1Q9NZ08 941 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 BTBD7Q9P203 1132 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 PRKCQQ04759 706 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 SPANXN2Q5MJ10 180 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 NAPEPLDQ6IQ20 393 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 KLHL17Q6TDP4 642 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 HEY2Q9UBP5 337 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 PABPC5Q96DU9 382 aaKnown RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 MPP4Q96JB8 637 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 APOL4Q9BPW4 351 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 CNTFP26441 200 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 E2F8A0AVK6 867 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 GPR162Q16538 588 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 WDR93Q6P2C0 686 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 C6orf62Q9GZU0 229 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 MED26O95402 600 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 CYP2E1P05181 493 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 PIK3R1P27986 724 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 RBP5P82980 135 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 SPASTQ9UBP0 616 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 RNF112Q9ULX5 631 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 KLHL20Q9Y2M5 609 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 CPDO75976 1380 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 PP2D1A8MPX8 630 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 MAGEA10P43363 369 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 HIST2H2ACQ16777 129 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 HIST2H2AA3Q6FI13 130 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 IRX2Q9BZI1 471 aaPredicted RBP17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 TRPC7Q9HCX4 862 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 SLAIN2Q9P270 581 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 TRIM10Q9UDY6 481 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 SLC30A1Q9Y6M5 507 aa17.5■□□□□ 0.39
SMCHD1-201ENST00000320876 LOC100653049A0A140TA62 436 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 RAD17O75943 681 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 KRT34O76011 436 aa17.49■□□□□ 0.39
SMCHD1-201ENST00000320876 CPB1P15086 417 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms