RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ZNF560Q96MR9 790 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 NT5C1AQ9BXI3 368 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 PRDM16Q9HAZ2 1276 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 MICAL3Q7RTP6 2002 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 hCG_1818297A0A087WSY0 165 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 TLR3O15455 904 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 FAM153BP0C7A2 387 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 FGFR4P22455 802 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 RPL9P32969 192 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 USP8P40818 1118 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 PTPN9P43378 593 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 CDH8P55286 799 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 GUCY2DQ02846 1103 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 FAM153CQ494X1 144 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 SV2CQ496J9 727 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 TMC3Q7Z5M5 1100 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 JAMLQ86YT9 394 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 PSMB7Q99436 277 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 HNRNPABQ99729 332 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 C11orf70Q9BRQ4 267 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 MIS12Q9H081 205 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 RAB17Q9H0T7 212 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 RNF39Q9H2S5 420 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 EPB41L5Q9HCM4 733 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 CSNK1G1Q9HCP0 422 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 FAM153AQ9UHL3 310 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 ZNF638Q14966 1978 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 ZSCAN5CA6NGD5 496 aaPredicted RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 MYO1FO00160 1098 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 XPOTO43592 962 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 LRCH4O75427 683 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 HARSP12081 509 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 SP3Q02447 781 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 TRADDQ15628 312 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 SGO2Q562F6 1265 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 SEL1L2Q5TEA6 688 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 PAQR9Q6ZVX9 377 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 BEND5Q7L4P6 421 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 PCSK9Q8NBP7 692 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 SLC35B2Q8TB61 432 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 C18orf25Q96B23 403 aaPredicted RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 RTP4Q96DX8 246 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 RBM41Q96IZ5 413 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 DDX47Q9H0S4 455 aaKnown RBP7.58□□□□□ -1.2
NPHP1-201ENST00000316534 UBN1Q9NPG3 1134 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 RGS18Q9NS28 235 aa7.58□□□□□ -1.2
NPHP1-201ENST00000316534 C9IYK1 514 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 TTI1O43156 1089 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 RARBP10826 455 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 COL6A1P12109 1028 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 YARSP54577 528 aaKnown RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 SLC7A5Q01650 507 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 DR1Q01658 176 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 PLCB3Q01970 1234 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 ERICH1Q86X53 443 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 TMEM86AQ8N2M4 240 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 ANKRD52Q8NB46 1076 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 UROC1Q96N76 676 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 NCAPGQ9BPX3 1015 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 AP1M1Q9BXS5 423 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 SRRM3A6NNA2 597 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 KPNA7A9QM74 516 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 TCEA3O75764 348 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 ITGAVP06756 1048 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 ASGR1P07306 291 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 LILRA4P59901 499 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 LPIN1Q14693 890 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 KCNA10Q16322 511 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 UPP1Q16831 310 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 SLC26A9Q7LBE3 791 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 BHLHA9Q7RTU4 235 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 RSPH1Q8WYR4 309 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 C18orf8Q96DM3 657 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 ZNF668Q96K58 619 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 HSFY1Q96LI6 401 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 AAASQ9NRG9 546 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 RNF19AQ9NV58 838 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 SLC38A7Q9NVC3 462 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 AMACRQ9UHK6 382 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 PLXNA4Q9HCM2 1894 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 GOLGA6L10A0A0M3HER8 536 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 A0A0U1RQF3 1178 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 HHLA1C9JL84 531 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 MDM4O15151 490 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 GPR182O15218 404 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 LIASO43766 372 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 MGEA5O60502 916 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 TRUB2O95900 331 aaKnown RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 TCF4P15884 667 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 GUCY2FP51841 1108 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 OSTNP61366 133 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 SKOR1P84550 965 aa7.57□□□□□ -1.2
NPHP1-201ENST00000316534 PPP1R26Q5T8A7 1209 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 OTUD1Q5VV17 481 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-201ENST00000316534 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms