RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CPPED1Q9BRF8 314 aaPredicted RBP4.73□□□□□ -1.65
SMCO3-201ENST00000316048 SPATA5L1Q9BVQ7 753 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 RGL1Q9NZL6 768 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.73□□□□□ -1.65
SMCO3-201ENST00000316048 ADAMTS20P59510 1910 aa4.73□□□□□ -1.65
SMCO3-201ENST00000316048 MAGI2Q86UL8 1455 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 DHRS4L1P0CG22 281 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 HK1P19367 917 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 CCT5P48643 541 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SLC4A8Q2Y0W8 1093 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ZIK1Q3SY52 487 aaPredicted RBP4.72□□□□□ -1.65
SMCO3-201ENST00000316048 RAP1GAP2Q684P5 730 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 FCRL6Q6DN72 434 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SULT6B1Q6IMI4 303 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 GPRIN1Q7Z2K8 1008 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ZFPM1Q8IX07 1006 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SLC46A1Q96NT5 459 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 MAGEB5Q9BZ81 275 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 MEGF9Q9H1U4 602 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 HESX1Q9UBX0 185 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ATP11BQ9Y2G3 1177 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ZFYVE16Q7Z3T8 1539 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ATP10AO60312 1499 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 RFXAPO00287 272 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 AREL1O15033 823 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 TRIM13O60858 407 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 PYGLP06737 847 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 CKBP12277 381 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 GYS1P13807 737 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 BTF3P20290 206 aaKnown RBP4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ACVR2AP27037 513 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 PPFIA1Q13136 1202 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 KCNA10Q16322 511 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ZNF648Q5T619 568 aaPredicted RBP4.72□□□□□ -1.65
SMCO3-201ENST00000316048 CCDC70Q6NSX1 233 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SLC30A10Q6XR72 485 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 FITM2Q8N6M3 262 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 STT3BQ8TCJ2 826 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 TRIM63Q969Q1 353 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 LMF1Q96S06 567 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SMOC2Q9H3U7 446 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 ETAA1Q9NY74 926 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 SH3BP1Q9Y3L3 701 aa4.72□□□□□ -1.65
SMCO3-201ENST00000316048 NEO1Q92859 1461 aa4.71□□□□□ -1.65
SMCO3-201ENST00000316048 AATKQ6ZMQ8 1374 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 INO80Q9ULG1 1556 aaPredicted RBP4.71□□□□□ -1.66
SMCO3-201ENST00000316048 DRGXA6NNA5 263 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 NOBOXO60393 691 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 PECAM1P16284 738 aaPredicted RBP4.71□□□□□ -1.66
SMCO3-201ENST00000316048 PLA1AQ53H76 456 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 ZNF385BQ569K4 471 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 TMTC4Q5T4D3 741 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 FAM160B1Q5W0V3 765 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 MMS22LQ6ZRQ5 1243 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 KIAA0408Q6ZU52 694 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 DOK3Q7L591 496 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 FAM71BQ8TC56 605 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 LTV1Q96GA3 475 aaPredicted RBP4.71□□□□□ -1.66
SMCO3-201ENST00000316048 BORCS6Q96GS4 357 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 MARS2Q96GW9 593 aaKnown RBP4.71□□□□□ -1.66
SMCO3-201ENST00000316048 FAM84AQ96KN4 292 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 UBXN10Q96LJ8 280 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 PCDHAC1Q9H158 963 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 MLXIPQ9HAP2 919 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 HEYLQ9NQ87 328 aaPredicted RBP4.71□□□□□ -1.66
SMCO3-201ENST00000316048 POGKQ9P215 609 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 SPATA31E1Q6ZUB1 1445 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 USP47Q96K76 1375 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 CCDC7Q96M83 1385 aa4.71□□□□□ -1.66
SMCO3-201ENST00000316048 PLA2R1Q13018 1463 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 MLH3Q9UHC1 1453 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 EIF3FO00303 357 aaPredicted RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 NCAM2O15394 837 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PTDSS1P48651 473 aaKnown RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 ZNF134P52741 427 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 LILRA4P59901 499 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 MC2RQ01718 297 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 SLC29A2Q14542 456 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 YAF2Q8IY57 180 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 CFAP52Q8N1V2 620 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 AOPEPQ8N6M6 819 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 OR52N2Q8NGI0 321 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 ZFP28Q8NHY6 868 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 UBE2Q2Q8WVN8 375 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 GGA3Q9NZ52 723 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 HDAC5Q9UQL6 1122 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 EIF2AK4Q9P2K8 1649 aaKnown RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 A2MP01023 1474 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 RALGAPBQ86X10 1494 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PRR5-ARHGAP8B1AHC4 643 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 TISP43B9A030 160 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 B9A039 149 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 hCG_1984214I3L0E3 225 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 LEFTY2O00292 366 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 POLRMTO00411 1230 aaKnown RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 HNRNPDLO14979 420 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms