RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZNF677Q86XU0 584 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 WDR48Q8TAF3 677 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 BTBD6Q96KE9 485 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 SPATA16Q9BXB7 569 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 MRPL42Q9Y6G3 142 aaKnown RBP14.08□□□□□ -0.16
RFFL-201ENST00000315249 TRIM55Q9BYV6 548 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 SFMBT1Q9UHJ3 866 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 SGPL1O95470 568 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 ATP1A1P05023 1023 aaKnown RBP14.08□□□□□ -0.16
RFFL-201ENST00000315249 SERPINI1Q99574 410 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 OSGEPL1Q9H4B0 414 aa14.08□□□□□ -0.16
RFFL-201ENST00000315249 E2F6O75461 281 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 EPB42P16452 691 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 TKTL1P51854 596 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 USP10Q14694 798 aaKnown RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 PKN3Q6P5Z2 889 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 ADGRG1Q9Y653 693 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 NRCAMQ92823 1304 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 ZNF185O15231 689 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 RD3Q7Z3Z2 195 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 CGRRF1Q99675 332 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 SYT15Q9BQS2 421 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 MROH7Q68CQ1 1323 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 SUPT3HB4E1H0 165 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 SUPT3HO75486 399 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 MLH1P40692 756 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 RGS4P49798 205 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 PRKCQQ04759 706 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 OSBPL8Q9BZF1 889 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 CAPN10Q9HC96 672 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 CISHQ9NSE2 258 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 ADGRA2Q96PE1 1338 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 P4HA2O15460 535 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 COMTP21964 271 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 SGO1Q5FBB7 561 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 KLHDC7AQ5VTJ3 777 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 TMEM176AQ96HP8 235 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 DCTN4Q9UJW0 460 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 STX7O15400 261 aaKnown RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 ACAD10Q6JQN1 1059 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 WDR49Q8IV35 697 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 CYP39A1Q9NYL5 469 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 TRIM33Q9UPN9 1127 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 AGRPO00253 132 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 SLFN11Q7Z7L1 901 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 CCDC138Q96M89 665 aa14.07□□□□□ -0.16
RFFL-201ENST00000315249 ZC3H7BQ9UGR2 993 aaKnown RBP14.07□□□□□ -0.16
RFFL-201ENST00000315249 SMIM10L2AP0DMW4 78 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 SMIM10L2BP0DMW5 78 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 NDUFV1P49821 464 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 CASP8Q14790 479 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 RASSF4Q9H2L5 321 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 RANBP17Q9H2T7 1088 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 EML4Q9HC35 981 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 GRK4P32298 578 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 OXCT1P55809 520 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 BYSLQ13895 437 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 FIBCD1Q8N539 461 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ALG13Q9NP73 1137 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 ITGA11Q9UKX5 1188 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 CASZ1Q86V15 1759 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 INPP1P49441 399 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 OTOP1Q7RTM1 612 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ZNF410Q86VK4 478 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 RGL4Q8IZJ4 473 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 RFWD2Q8NHY2 731 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 CCDC124Q96CT7 223 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 RARRES1P49788 294 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 PLCL1Q15111 1095 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ANKRD20A4Q4UJ75 823 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ANKRD20A2Q5SQ80 823 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ANKRD20A1Q5TYW2 823 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 ZNF558Q96NG5 402 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 NMRK2Q9NPI5 230 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 C2orf81A6NN90 581 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 RECQL4O94761 1208 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 OCM2P0CE71 109 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 OCMP0CE72 109 aaPredicted RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 TAF11Q15544 211 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 FAM71DQ8N9W8 422 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 USP13Q92995 863 aaPredicted RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 PPP1R2P1Q96PQ5 205 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 FBXO44Q9H4M3 255 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 LACTBL1A8MY62 500 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
RFFL-201ENST00000315249 EFTUD2Q15029 972 aaKnown RBP eCLIP14.06□□□□□ -0.162e-9■■■□□ 16
RFFL-201ENST00000315249 NAB2Q15742 525 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 KCNT1Q5JUK3 1230 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 EMBQ6PCB8 327 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms