RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 WDR49Q8IV35 697 aa8.8□□□□□ -1
CHD6-201ENST00000309279 FAM186BQ8IYM0 893 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TCEAL8Q8IYN2 117 aa8.8□□□□□ -1
CHD6-201ENST00000309279 RNF168Q8IYW5 571 aaPredicted RBP8.8□□□□□ -1
CHD6-201ENST00000309279 CSGALNACT2Q8N6G5 542 aa8.8□□□□□ -1
CHD6-201ENST00000309279 BEST2Q8NFU1 509 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SPPL3Q8TCT6 385 aa8.8□□□□□ -1
CHD6-201ENST00000309279 NOC3LQ8WTT2 800 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 CACTINQ8WUQ7 758 aaKnown RBP8.8□□□□□ -1
CHD6-201ENST00000309279 EEF2KMTQ96G04 330 aa8.8□□□□□ -1
CHD6-201ENST00000309279 NCAPGQ9BPX3 1015 aa8.8□□□□□ -1
CHD6-201ENST00000309279 C11orf84Q9BUA3 381 aaPredicted RBP8.8□□□□□ -1
CHD6-201ENST00000309279 GOLGA2P5Q9HBQ8 144 aa8.8□□□□□ -1
CHD6-201ENST00000309279 INTS13Q9NVM9 706 aa8.8□□□□□ -1
CHD6-201ENST00000309279 MARCH5Q9NX47 278 aa8.8□□□□□ -1
CHD6-201ENST00000309279 SPG21Q9NZD8 308 aa8.8□□□□□ -1
CHD6-201ENST00000309279 TUBGCP4Q9UGJ1 667 aa8.8□□□□□ -1
CHD6-201ENST00000309279 MTUS1Q9ULD2 1270 aa8.8□□□□□ -1
CHD6-201ENST00000309279 DGKBQ9Y6T7 804 aa8.8□□□□□ -1
CHD6-201ENST00000309279 PTPRJQ12913 1337 aa8.79□□□□□ -1
CHD6-201ENST00000309279 SYCE3A1L190 88 aa8.79□□□□□ -1
CHD6-201ENST00000309279 EPOPA6NHQ4 379 aa8.79□□□□□ -1
CHD6-201ENST00000309279 NT5C1B-RDH14C9J2C7 533 aa8.79□□□□□ -1
CHD6-201ENST00000309279 PIRO00625 290 aa8.79□□□□□ -1
CHD6-201ENST00000309279 FGF18O76093 207 aa8.79□□□□□ -1
CHD6-201ENST00000309279 ITGB1P05556 798 aa8.79□□□□□ -1
CHD6-201ENST00000309279 CCDC192P0DO97 292 aa8.79□□□□□ -1
CHD6-201ENST00000309279 DLATP10515 647 aaKnown RBP8.79□□□□□ -1
CHD6-201ENST00000309279 EPB41P11171 864 aaKnown RBP8.79□□□□□ -1
CHD6-201ENST00000309279 PLA2G4AP47712 749 aa8.79□□□□□ -1
CHD6-201ENST00000309279 AP3M2P53677 418 aa8.79□□□□□ -1
CHD6-201ENST00000309279 TFAMQ00059 246 aaKnown RBP8.79□□□□□ -1
CHD6-201ENST00000309279 UBE3AQ05086 875 aa8.79□□□□□ -1
CHD6-201ENST00000309279 BFSP1Q12934 665 aa8.79□□□□□ -1
CHD6-201ENST00000309279 SQSTM1Q13501 440 aa8.79□□□□□ -1
CHD6-201ENST00000309279 GRIN2CQ14957 1233 aa8.79□□□□□ -1
CHD6-201ENST00000309279 MUM1Q2TAK8 710 aa8.79□□□□□ -1
CHD6-201ENST00000309279 ZSCAN23Q3MJ62 389 aa8.79□□□□□ -1
CHD6-201ENST00000309279 C1orf220Q5T0J3 134 aa8.79□□□□□ -1
CHD6-201ENST00000309279 RSRC2Q7L4I2 434 aaKnown RBP8.79□□□□□ -1
CHD6-201ENST00000309279 FRMD5Q7Z6J6 570 aa8.79□□□□□ -1
CHD6-201ENST00000309279 USP37Q86T82 979 aa8.79□□□□□ -1
CHD6-201ENST00000309279 DDX53Q86TM3 631 aaKnown RBP8.79□□□□□ -1
CHD6-201ENST00000309279 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
CHD6-201ENST00000309279 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
CHD6-201ENST00000309279 OR5B17Q8NGF7 314 aa8.79□□□□□ -1
CHD6-201ENST00000309279 RSAD2Q8WXG1 361 aa8.79□□□□□ -1
CHD6-201ENST00000309279 ARNTL2Q8WYA1 636 aa8.79□□□□□ -1
CHD6-201ENST00000309279 ZNF516Q92618 1163 aa8.79□□□□□ -1
CHD6-201ENST00000309279 CCDC127Q96BQ5 260 aa8.79□□□□□ -1
CHD6-201ENST00000309279 THAP11Q96EK4 314 aa8.79□□□□□ -1
CHD6-201ENST00000309279 FNBP1Q96RU3 617 aa8.79□□□□□ -1
CHD6-201ENST00000309279 POP1Q99575 1024 aaKnown RBP8.79□□□□□ -1
CHD6-201ENST00000309279 CGRRF1Q99675 332 aa8.79□□□□□ -1
CHD6-201ENST00000309279 COLEC11Q9BWP8 271 aa8.79□□□□□ -1
CHD6-201ENST00000309279 ASPSCR1Q9BZE9 553 aa8.79□□□□□ -1
CHD6-201ENST00000309279 CDH19Q9H159 772 aa8.79□□□□□ -1
CHD6-201ENST00000309279 CERS4Q9HA82 394 aa8.79□□□□□ -1
CHD6-201ENST00000309279 NEUROD4Q9HD90 331 aa8.79□□□□□ -1
CHD6-201ENST00000309279 DPP3Q9NY33 737 aa8.79□□□□□ -1
CHD6-201ENST00000309279 CACNG4Q9UBN1 327 aa8.79□□□□□ -1
CHD6-201ENST00000309279 STK39Q9UEW8 545 aa8.79□□□□□ -1
CHD6-201ENST00000309279 ADAM28Q9UKQ2 775 aa8.79□□□□□ -1
CHD6-201ENST00000309279 LRRIQ3A6PVS8 624 aaPredicted RBP8.78□□□□□ -1
CHD6-201ENST00000309279 F8W810 466 aa8.78□□□□□ -1
CHD6-201ENST00000309279 PODXLO00592 558 aa8.78□□□□□ -1
CHD6-201ENST00000309279 B3GAT3O94766 335 aa8.78□□□□□ -1
CHD6-201ENST00000309279 FGFR1OPO95684 399 aaKnown RBP8.78□□□□□ -1
CHD6-201ENST00000309279 GNA14O95837 355 aa8.78□□□□□ -1
CHD6-201ENST00000309279 C4BPAP04003 597 aaKnown RBP8.78□□□□□ -1
CHD6-201ENST00000309279 MMEP08473 750 aa8.78□□□□□ -1
CHD6-201ENST00000309279 TNNI1P19237 187 aa8.78□□□□□ -1
CHD6-201ENST00000309279 IGFBP6P24592 240 aaPredicted RBP8.78□□□□□ -1
CHD6-201ENST00000309279 AARSP49588 968 aaKnown RBP eCLIP8.78□□□□□ -1
CHD6-201ENST00000309279 VAMP7P51809 220 aa8.78□□□□□ -1
CHD6-201ENST00000309279 DLG4P78352 724 aa8.78□□□□□ -1
CHD6-201ENST00000309279 KRT17Q04695 432 aa8.78□□□□□ -1
CHD6-201ENST00000309279 GPM6BQ13491 265 aa8.78□□□□□ -1
CHD6-201ENST00000309279 MTMR3Q13615 1198 aa8.78□□□□□ -1
CHD6-201ENST00000309279 CAMK1Q14012 370 aa8.78□□□□□ -1
CHD6-201ENST00000309279 SWI5Q1ZZU3 235 aa8.78□□□□□ -1
CHD6-201ENST00000309279 C9orf57Q5W0N0 161 aa8.78□□□□□ -1
CHD6-201ENST00000309279 NXNQ6DKJ4 435 aa8.78□□□□□ -1
CHD6-201ENST00000309279 C15orf39Q6ZRI6 1047 aa8.78□□□□□ -1
CHD6-201ENST00000309279 C11orf57Q6ZUT1 292 aaPredicted RBP8.78□□□□□ -1
CHD6-201ENST00000309279 TRAPPC11Q7Z392 1133 aa8.78□□□□□ -1
CHD6-201ENST00000309279 IRF2BP1Q8IU81 584 aa8.78□□□□□ -1
CHD6-201ENST00000309279 BCL7CQ8WUZ0 217 aaPredicted RBP8.78□□□□□ -1
CHD6-201ENST00000309279 TMEM169Q96HH4 297 aa8.78□□□□□ -1
CHD6-201ENST00000309279 ANKRD36BP1Q96IX9 119 aa8.78□□□□□ -1
CHD6-201ENST00000309279 BPIFA3Q9BQP9 254 aa8.78□□□□□ -1
CHD6-201ENST00000309279 VN1R3Q9BXE9 311 aa8.78□□□□□ -1
CHD6-201ENST00000309279 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
CHD6-201ENST00000309279 LMAN2LQ9H0V9 348 aa8.78□□□□□ -1
CHD6-201ENST00000309279 RBSNQ9H1K0 784 aa8.78□□□□□ -1
CHD6-201ENST00000309279 ALG13Q9NP73 1137 aaKnown RBP8.78□□□□□ -1
CHD6-201ENST00000309279 LMCD1Q9NZU5 365 aa8.78□□□□□ -1
CHD6-201ENST00000309279 EPS15L1Q9UBC2 864 aa8.78□□□□□ -1
CHD6-201ENST00000309279 ARMCX3Q9UH62 379 aaPredicted RBP8.78□□□□□ -1
CHD6-201ENST00000309279 SIX4Q9UIU6 781 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms