RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ZNF623O75123 536 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PDCLQ13371 301 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 DSC3Q14574 896 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 ZNF268Q14587 947 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 LPIN1Q14693 890 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PKDCCQ504Y2 493 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 LHX8Q68G74 356 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 HDXQ7Z353 690 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 XYLT1Q86Y38 959 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 RHOT1Q8IXI2 618 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 IFT20Q8IY31 132 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 GSTCDQ8NEC7 633 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 FNIP1Q8TF40 1166 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 KBTBD7Q8WVZ9 684 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 C18orf8Q96DM3 657 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 MCEEQ96PE7 176 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 OSBPL7Q9BZF2 842 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 C11orf49Q9H6J7 331 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 TSPAN16Q9UKR8 245 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PADI3Q9ULW8 664 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 GIT1Q9Y2X7 761 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SQORQ9Y6N5 450 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 MEIS3P2A8K0S8 358 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PHF2O75151 1096 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 ERBB2P04626 1255 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PFKMP08237 780 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SETSIPP0DME0 302 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 RAB27AP51159 221 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 TAS2R40P59535 323 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 OGDHQ02218 1023 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PAK2Q13177 524 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PIGHQ14442 188 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SIX1Q15475 284 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 GSPT2Q8IYD1 628 aaKnown RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 KATNAL2Q8IYT4 538 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 ZDHHC14Q8IZN3 488 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 EIF1ADQ8N9N8 165 aaKnown RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 SLC43A3Q8NBI5 491 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 MCRS1Q96EZ8 462 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 GLT1D1Q96MS3 346 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 CDX2Q99626 313 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-205ENST00000307859 PTPRDP23468 1912 aa12.55□□□□□ -0.4
TRIM40-205ENST00000307859 ZSCAN5CA6NGD5 496 aaPredicted RBP12.54□□□□□ -0.4
TRIM40-205ENST00000307859 FSCN2O14926 492 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 MGEA5O60502 916 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 FAM163BP0C2L3 166 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 GHRP10912 638 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 FGFR1P11362 822 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 CD52P31358 61 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 MLH1P40692 756 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 LILRA4P59901 499 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 PSMC1P62191 440 aaKnown RBP12.54□□□□□ -0.4
TRIM40-205ENST00000307859 GUCY2DQ02846 1103 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 CASP8Q14790 479 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 PPP1R26Q5T8A7 1209 aaPredicted RBP12.54□□□□□ -0.4
TRIM40-205ENST00000307859 LRRC38Q5VT99 294 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 DCUN1D2Q6PH85 259 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 AGMOQ6ZNB7 445 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 DPH6Q7L8W6 267 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 ACOT1Q86TX2 421 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 CRYBG2Q8N1P7 616 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 TOP6BLQ8N6T0 577 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 PRELID2Q8N945 189 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 C12orf50Q8NA57 414 aaPredicted RBP12.54□□□□□ -0.4
TRIM40-205ENST00000307859 OR6B3Q8NGW1 331 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 TANC1Q9C0D5 1861 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 EPB41L5Q9HCM4 733 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 AMACRQ9UHK6 382 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
TRIM40-205ENST00000307859 KRT3P12035 628 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
TRIM40-205ENST00000307859 CHRNA3P32297 505 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 EPHB4P54760 987 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 DAB2IPQ5VWQ8 1189 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 EMBQ6PCB8 327 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 TRAF7Q6Q0C0 670 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 APPL2Q8NEU8 664 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
TRIM40-205ENST00000307859 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
TRIM40-205ENST00000307859 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms