RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 DCLK3Q9C098 648 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 HEY1Q9Y5J3 304 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PRRC2BQ5JSZ5 2229 aaKnown RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 TRIM66O15016 1216 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 VCLP18206 1134 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 LINC00523Q86TU6 105 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 WDR49Q8IV35 697 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 AKAP7Q9P0M2 348 aaPredicted RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 TBK1Q9UHD2 729 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 FBXO2Q9UK22 296 aaPredicted RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 CAPN15O75808 1086 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 EIF4A3P38919 411 aaKnown RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ZSCAN26Q16670 478 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PRAMEF18Q5VWM3 479 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 RASSF3Q86WH2 238 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 RCOR2Q8IZ40 523 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 TSPAN17Q96FV3 270 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 POLE3Q9NRF9 147 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 DDTLA6NHG4 134 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 PQBP1O60828 265 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 PYGMP11217 842 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CDC25AP30304 524 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CTCFP49711 727 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 GRAMD4Q6IC98 578 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 SLC27A1Q6PCB7 646 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CATSPER3Q86XQ3 398 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 FBXO16Q8IX29 292 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 SPATS2LQ9NUQ6 558 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 RNF103-CHMP3A0A140T963 221 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 ADM5C9JUS6 153 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DMC1Q14565 340 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 GPR142Q7Z601 462 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 BBS7Q8IWZ6 715 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 RIN2Q8WYP3 895 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 KAZALD1Q96I82 304 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 EPB41L5Q9HCM4 733 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DMAP1Q9NPF5 467 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 FBXO28Q9NVF7 368 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 SNTNA6NMZ2 147 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 H0Y626 953 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TRIM16O95361 564 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 RGS4P49798 205 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 PDK1Q15118 436 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 NOL9Q5SY16 702 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CALML6Q8TD86 181 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 PDCD2LQ9BRP1 358 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TLR8Q9NR97 1041 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CEP290O15078 2479 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TEX28O15482 410 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CHRNA3P32297 505 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CARSP49589 748 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 NME3Q13232 169 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 SEC23AQ15436 765 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DCAF6Q58WW2 860 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 C16orf87Q6PH81 154 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TAAR1Q96RJ0 339 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DTNAQ9Y4J8 743 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 MRFAP1Q9Y605 127 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 SF3B1O75533 1304 aaKnown RBP eCLIP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CNTNAP2Q9UHC6 1331 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 MAP3K13O43283 966 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 MFAP3LO75121 409 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 STOX1Q6ZVD7 989 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DSG4Q86SJ6 1040 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 COG1Q8WTW3 980 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 P2RX7Q99572 595 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CCDC90BQ9GZT6 254 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 VPS11Q9H270 941 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM60Q9H2L4 133 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 UNC45AQ9H3U1 944 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 TRPM5Q9NZQ8 1165 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 A0A1W2PQJ5 194 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 ERN1O75460 977 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 UPP2O95045 317 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DARSP14868 501 aaKnown RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 IL10P22301 178 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 RTP1P59025 263 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 CACNB1Q02641 598 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 BTG3Q14201 252 aaPredicted RBP8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 SNX30Q5VWJ9 437 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 DDIASQ8IXT1 998 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 RAPGEF5Q92565 580 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 ABHD10Q9NUJ1 306 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 NMRK1Q9NWW6 199 aa8.68□□□□□ -1.02
PCDHB1-201ENST00000306549 KRT14P02533 472 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 TIGD7Q6NT04 549 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 SMYD4Q8IYR2 804 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNF564Q8TBZ8 553 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 CAPNS2Q96L46 248 aa8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 MYCBPQ99417 103 aaPredicted RBP8.67□□□□□ -1.02
PCDHB1-201ENST00000306549 ELOVL4Q9GZR5 314 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms