RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 EFCAB10A6NFE3 127 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 FAM220BPB1ANY3 271 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PRODHO43272 600 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 CASP12Q6UXS9 341 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 LSM7Q9UK45 103 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 LOC100506127A0A0U1RQW1 187 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 ECE2O60344 883 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PAIP1Q9H074 479 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 SH3BP4Q9P0V3 963 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 CCDC182A6NF36 153 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PSMD12O00232 456 aaPredicted RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 SPRP35270 261 aaPredicted RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 RCOR2Q8IZ40 523 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 EHD3Q9NZN3 535 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 BTBD3Q9Y2F9 522 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PSMD3O43242 534 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 GRAP2O75791 330 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 SCRN3Q0VDG4 424 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 RMDN3Q96TC7 470 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 ITGB1BP2Q9UKP3 347 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 GRK4P32298 578 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 DYNLL1P63167 89 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 MAGED4Q96JG8 741 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 UTYO14607 1347 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CITO14578 2027 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 GCP02774 474 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ABCB1P08183 1280 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 FNTAP49354 379 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 MCPH1Q8NEM0 835 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 IP6K1Q92551 441 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 DSEQ9UL01 958 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ANO9A1A5B4 782 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 F8VZ95 297 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 RAD51BO15315 384 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CASP1P29466 404 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PBLDP30039 288 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PRCPP42785 496 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 C21orf59P57076 290 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 KBTBD12Q3ZCT8 623 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ARHGAP22Q7Z5H3 698 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 RBAKQ9NYW8 714 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 TRPC4Q9UBN4 977 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CFAP43Q8NDM7 1665 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 POLR3AO14802 1390 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 UGGT2Q9NYU1 1516 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CHURC1-FNTBB4DL54 471 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 HLA-DQA2P01906 255 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 LIN54Q6MZP7 749 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 INTS2Q9H0H0 1204 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PRRG1O14668 218 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ATG7O95352 703 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CACNA2D1P54289 1103 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 TRAF3Q13114 568 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ABRAXAS1Q6UWZ7 409 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 KIF1BO60333 1816 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PTK6Q13882 451 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 FAM83EQ2M2I3 478 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ARL6IP4Q66PJ3 421 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 SLC30A5Q8TAD4 765 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 SPATA18Q8TC71 538 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 MGAT4DA6NG13 374 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 RBMXL2O75526 392 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PSMD4P55036 377 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 SCUBE1Q8IWY4 988 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 FAM172AQ8WUF8 416 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CPA5Q8WXQ8 436 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 VWA5AO00534 786 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 DHX40Q8IX18 779 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PJA1Q8NG27 643 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 FAM167AQ96KS9 214 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 KLF6Q99612 283 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 MYL12BO14950 172 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PHF2O75151 1096 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 CPSF4O95639 269 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 PRELPP51888 382 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 FAM83BQ5T0W9 1011 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 BHMTQ93088 406 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 BTBD7Q9P203 1132 aa13.88□□□□□ -0.19
TRIM56-201ENST00000306085 LIMA1Q9UHB6 759 aaKnown RBP13.88□□□□□ -0.19
TRIM56-201ENST00000306085 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
TRIM56-201ENST00000306085 ITGA1P56199 1179 aa13.87□□□□□ -0.19
TRIM56-201ENST00000306085 PPIDQ08752 370 aaKnown RBP13.87□□□□□ -0.19
TRIM56-201ENST00000306085 CCDC185Q8N715 623 aa13.87□□□□□ -0.19
TRIM56-201ENST00000306085 GAL3ST3Q96A11 431 aa13.87□□□□□ -0.19
TRIM56-201ENST00000306085 CMTM6Q9NX76 183 aa13.87□□□□□ -0.19
TRIM56-201ENST00000306085 NUDT14O95848 222 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms