RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ITFG2Q969R8 447 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 CLMNQ96JQ2 1002 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 GCNAQ96QF7 691 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 GPR88Q9GZN0 384 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 NDUFA13Q9P0J0 144 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 NOCTQ9UK39 431 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 PRR12Q9ULL5 1215 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SOX13Q9UN79 622 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 HEY1Q9Y5J3 304 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 LIASO43766 372 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SERPINB2P05120 415 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 GLRA2P23416 452 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ACOT2P49753 483 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 COPAP53621 1224 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 NFIAQ12857 509 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 MYBPC2Q14324 1141 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 MROH9Q5TGP6 573 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SPOPLQ6IQ16 392 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 RHBDF2Q6PJF5 856 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 NLRX1Q86UT6 975 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 TRIM74Q86UV6 250 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 TRIM73Q86UV7 250 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 GSTCDQ8NEC7 633 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SEMA4DQ92854 862 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SPATA16Q9BXB7 569 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 CALB1P05937 261 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ADRB2P07550 413 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SNHG28P0DPA3 235 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ZBTB48P10074 688 aaPredicted RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 VAV1P15498 845 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 EIF2AK2P19525 551 aaKnown RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 BMPR2Q13873 1038 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 TFDP3Q5H9I0 405 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 TCHHL1Q5QJ38 904 aaPredicted RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 RARS2Q5T160 578 aaKnown RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 NET1Q7Z628 596 aaPredicted RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 DEPTORQ8TB45 409 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 APOPT1Q96IL0 206 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SRPK1Q96SB4 655 aaKnown RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 PCDH9Q9HC56 1237 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 RAB6BQ9NRW1 208 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 DDX56Q9NY93 547 aaKnown RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 NYAP2Q9P242 653 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ZC3H7BQ9UGR2 993 aaKnown RBP13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ZHX2Q9Y6X8 837 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 TMEM150BA6NC51 233 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ALOX15BO15296 676 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 HLA-DRAP01903 254 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ELK3P41970 407 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 CDK7P50613 346 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 PPP2R5DQ14738 602 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 LPCAT4Q643R3 524 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 ZCCHC23Q6ZST2 131 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 SLCO2A1Q92959 643 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 APPL1Q9UKG1 709 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
TRIM35-201ENST00000305364 MTA2O94776 668 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 TMCC1O94876 653 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 MAP7D1Q3KQU3 841 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 NLRP7Q8WX94 980 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 CD101Q93033 1021 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 MECRQ9BV79 373 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 MMADHCQ9H3L0 296 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 AVENQ9NQS1 362 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 NENFQ9UMX5 172 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 A6NJR5 290 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 EDIL3O43854 480 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 PSMC4P43686 418 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 USP46P62068 366 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SEPT6Q14141 434 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 TNFAIP8L3Q5GJ75 292 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SLC9A9Q8IVB4 645 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 ZSWIM2Q8NEG5 633 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SERPINI1Q99574 410 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 UBE2OQ9C0C9 1292 aaKnown RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SEPT9Q9UHD8 586 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 IRF6O14896 467 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 MAGEB2O15479 319 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 ZBED1O96006 694 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 APRTP07741 180 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 MUTP22033 750 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 KBTBD12Q3ZCT8 623 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 TTC39BQ5VTQ0 682 aaPredicted RBP13.61□□□□□ -0.23
TRIM35-201ENST00000305364 PPP1R2P3Q6NXS1 205 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 KLHL23Q8NBE8 558 aa13.61□□□□□ -0.23
TRIM35-201ENST00000305364 GLIS1Q8NBF1 620 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms