RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
PDS5A-201ENST00000303538 N6AMT1Q9Y5N5 214 aa17.41■□□□□ 0.38
PDS5A-201ENST00000303538 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
PDS5A-201ENST00000303538 POMCP01189 267 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 SPRP35270 261 aaPredicted RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 PTK7Q13308 1070 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 MYCBPQ99417 103 aaPredicted RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 CRB1P82279 1406 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 EXTL3O43909 919 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 PDHBP11177 359 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 GRK3P35626 688 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 KCNK10P57789 538 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 MRPS15P82914 257 aaKnown RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 ASCC2Q9H1I8 757 aaPredicted RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 CAND2O75155 1236 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 ZNF286BP0CG31 522 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 TFB1MQ8WVM0 346 aaKnown RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 SPATA31A6Q5VVP1 1343 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 SLC12A8A0AV02 714 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 DHX34Q14147 1143 aaKnown RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 PGS1Q32NB8 556 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 THUMPD3Q9BV44 507 aaKnown RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 TRPM5Q9NZQ8 1165 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 GSTM1P09488 218 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 SHC4Q6S5L8 630 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 MMGT1Q8N4V1 131 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 GRID2IPA4D2P6 1211 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 CBX4O00257 560 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 BYSLQ13895 437 aaKnown RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
PDS5A-201ENST00000303538 ECSITQ9BQ95 431 aa17.4■□□□□ 0.38
PDS5A-201ENST00000303538 PSMD12O00232 456 aaPredicted RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 UGT3A1Q6NUS8 523 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 FMR1NBQ8N0W7 255 aaPredicted RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 VPS50Q96JG6 964 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 HSPA9P38646 679 aaKnown RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 NOL9Q5SY16 702 aaKnown RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 CCDC81Q6ZN84 652 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 KRT35Q92764 455 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 NDEL1Q9GZM8 345 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 ADARB2Q9NS39 739 aaKnown RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 TSPAN3O60637 253 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 ALDH2P05091 517 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 NME5P56597 212 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 STAT4Q14765 748 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 ZNF512BQ96KM6 892 aaPredicted RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 YIPF3Q9GZM5 350 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 KRT84Q9NSB2 600 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 IGSF9BQ9UPX0 1349 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 PSMA3P25788 255 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 PDIA5Q14554 519 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 PCYOX1LQ8NBM8 494 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 ARMC2Q8NEN0 867 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 RIN2Q8WYP3 895 aaPredicted RBP17.39■□□□□ 0.37
PDS5A-201ENST00000303538 PADI4Q9UM07 663 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 KIF2CQ99661 725 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 MSRAQ9UJ68 235 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
PDS5A-201ENST00000303538 FGFR2P21802 821 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 PCYT1AP49585 367 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 B3GALNT2Q8NCR0 500 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 LNPEPQ9UIQ6 1025 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 TDRKHQ9Y2W6 561 aaKnown RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 FYNP06241 537 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 PNPLA4P41247 253 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 ACTN3Q08043 901 aaPredicted RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 SGCGQ13326 291 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 ALX1Q15699 326 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 CSGALNACT1Q8TDX6 532 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 GOLPH3Q9H4A6 298 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 ZNF189O75820 626 aaPredicted RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 ALDH9A1P49189 494 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 DENND5BQ6ZUT9 1274 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 PGLYRP2Q96PD5 576 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 DAB1O75553 588 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 ITGB6P18564 788 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 TRIM32Q13049 653 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 MED8Q96G25 268 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 IQSEC2Q5JU85 1478 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 PCSK9Q8NBP7 692 aaKnown RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 GLIS2Q9BZE0 524 aaPredicted RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 TRIM9Q9C026 710 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 NIF3L1Q9GZT8 377 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 MIR1-1HGQ9H1L0 117 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 TIMM13Q9Y5L4 95 aaPredicted RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 SOAT2O75908 522 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 CPSF4O95639 269 aaKnown RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 PNMA6AP0CW24 399 aaPredicted RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 RAP1GAPP47736 663 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 OXCT1P55809 520 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 MTF1Q14872 753 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 PDIA6Q15084 440 aa17.38■□□□□ 0.37
PDS5A-201ENST00000303538 SHROOM1Q2M3G4 852 aaPredicted RBP17.38■□□□□ 0.37
PDS5A-201ENST00000303538 USP39Q53GS9 565 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms