RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 GNL1P36915 607 aaPredicted RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 COILP38432 576 aaPredicted RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 LILRA4P59901 499 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 KLF1Q13351 362 aaPredicted RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 DSC3Q14574 896 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 TRIM71Q2Q1W2 868 aaKnown RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 PPP1R26Q5T8A7 1209 aaPredicted RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 CCDC137Q6PK04 289 aaKnown RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 SND1Q7KZF4 910 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLP1-201ENST00000302731 TMEM110Q86TL2 294 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 ACOT1Q86TX2 421 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 GSPT2Q8IYD1 628 aaKnown RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 ZDHHC14Q8IZN3 488 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 GSTCDQ8NEC7 633 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 SLC35F5Q8WV83 523 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 IFT81Q8WYA0 676 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 TNIP3Q96KP6 325 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 GLT1D1Q96MS3 346 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 ERP44Q9BS26 406 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 SEZ6LQ9BYH1 1024 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 UBN1Q9NPG3 1134 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 PADI3Q9ULW8 664 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 EFR3BQ9Y2G0 817 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 F8VP50 259 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 SPTLC1O15269 473 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 GJB6O95452 261 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 THP07101 528 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 KRT7P08729 469 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 PSMA2P25787 234 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 ECHS1P30084 290 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 RPL9P32969 192 aaKnown RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 SCNN1AP37088 669 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 PTGIRP43119 386 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 RPL34P49207 117 aaKnown RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 CBX1P83916 185 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 OGDHQ02218 1023 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 HADHQ16836 314 aaKnown RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 GOLGA7BQ2TAP0 167 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 ALS2CLQ60I27 953 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 DUPD1Q68J44 220 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 FAM43BQ6ZT52 329 aaPredicted RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 SYDE1Q6ZW31 735 aaPredicted RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 JAMLQ86YT9 394 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 C12orf29Q8N999 325 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 SLC43A3Q8NBI5 491 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 NCAPGQ9BPX3 1015 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 NME7Q9Y5B8 376 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 A0A0U1RQF3 1178 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 TCRBV7S2A1N4TA0A589 114 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 GOLGA8SH3BPF8 625 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 FKTNO75072 461 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 PCK1P35558 622 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 BCAT1P54687 386 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
CLP1-201ENST00000302731 CCNG2Q16589 344 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 ARCQ7LC44 396 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 ADAT2Q7Z6V5 191 aaKnown RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 TTC30AQ86WT1 665 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 CCDC50Q8IVM0 306 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 ADGRF2Q8IZF7 708 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 TMEM86AQ8N2M4 240 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 UBA3Q8TBC4 463 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 SPATA18Q8TC71 538 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 GRK7Q8WTQ7 553 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 LRRC45Q96CN5 670 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 PGBD4Q96DM1 585 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 HINFPQ9BQA5 517 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 OSBPL8Q9BZF1 889 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 HMX1Q9NP08 348 aaPredicted RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
CLP1-201ENST00000302731 SAGE1Q9NXZ1 904 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 TJP2Q9UDY2 1190 aa11.17□□□□□ -0.62
CLP1-201ENST00000302731 E5RJQ4 531 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 DPYSL4O14531 572 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 GABRDO14764 452 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 INPPL1O15357 1258 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 LRCH4O75427 683 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 RNF8O76064 485 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 TJP3O95049 919 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 ECEL1O95672 775 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 INHAP05111 366 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 RALAP11233 206 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 FGFR1P11362 822 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 CD52P31358 61 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 HSPA9P38646 679 aaKnown RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 MLH1P40692 756 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 SSR1P43307 286 aaKnown RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 ACADSBP45954 432 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms