RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 SIX5Q8N196 739 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
CLCC1-201ENST00000302500 MYCBPAPQ8TBZ2 947 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 WHAMMQ8TF30 809 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 MYLPFQ96A32 169 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
CLCC1-201ENST00000302500 SYT15Q9BQS2 421 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 PI4K2AQ9BTU6 479 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 TTLL2Q9BWV7 592 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 SLC46A2Q9BY10 475 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 ARHGEF3Q9NR81 526 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 ABI2Q9NYB9 513 aaPredicted RBP12.05□□□□□ -0.48
CLCC1-201ENST00000302500 IL37Q9NZH6 218 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 MAN1B1Q9UKM7 699 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 PCDHB5Q9Y5E4 795 aa12.05□□□□□ -0.48
CLCC1-201ENST00000302500 GVINP1Q7Z2Y8 2422 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 FAM92AA1XBS5 289 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 TRIM49P0CI25 452 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 TRIM49CP0CI26 452 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 MYL4P12829 197 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 GABRR2P28476 465 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 PCSK1P29120 753 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 ALDH1A3P47895 512 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 VAMP7P51809 220 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 CDH8P55286 799 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 USP46P62068 366 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 ZXDBP98169 803 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 MYL7Q01449 175 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 INCA1Q0VD86 236 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 DDR2Q16832 855 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 SDHAF4Q5VUM1 108 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 ANKRD40Q6AI12 368 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 IQCEQ6IPM2 695 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 TTI2Q6NXR4 508 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 CCDC105Q8IYK2 499 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 DCP1BQ8IZD4 617 aaKnown RBP12.04□□□□□ -0.48
CLCC1-201ENST00000302500 MAML2Q8IZL2 1156 aaPredicted RBP12.04□□□□□ -0.48
CLCC1-201ENST00000302500 NOC3LQ8WTT2 800 aaKnown RBP12.04□□□□□ -0.48
CLCC1-201ENST00000302500 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 EEF2KMTQ96G04 330 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 SPATA17Q96L03 361 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 CEP295NLQ96MC4 621 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 TWNKQ96RR1 684 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 SEPT5Q99719 369 aaPredicted RBP12.04□□□□□ -0.48
CLCC1-201ENST00000302500 GCNT4Q9P109 453 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 COQ4Q9Y3A0 265 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 HCN4Q9Y3Q4 1203 aa12.04□□□□□ -0.48
CLCC1-201ENST00000302500 OTOGLQ3ZCN5 2332 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 TRIM49BA6NDI0 452 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 TNFRSF10BO14763 440 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 OLFM2O95897 454 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 RAP1GAPP47736 663 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 CYP4F8P98187 520 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 TSPY1Q01534 308 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 MGAT5BQ3V5L5 792 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 CYP4A22Q5TCH4 519 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 VSTM1Q6UX27 236 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 INTS8Q75QN2 995 aaKnown RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 ARID3BQ8IVW6 561 aaPredicted RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 FUKQ8N0W3 1084 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 CRYBG2Q8N1P7 616 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 UBR7Q8N806 425 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 ZMIZ2Q8NF64 920 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 GIPC2Q8TF65 315 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 TAF4BQ92750 862 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 DNASE1L2Q92874 299 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 SYAP1Q96A49 352 aaPredicted RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 SLC22A12Q96S37 553 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 GPR88Q9GZN0 384 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 TBC1D17Q9HA65 648 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 OBP2AQ9NY56 170 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 MTF2Q9Y483 593 aaPredicted RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 MYH10P35580 1976 aa12.03□□□□□ -0.48
CLCC1-201ENST00000302500 RIF1Q5UIP0 2472 aaKnown RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 ZFHX2Q9C0A1 2572 aaPredicted RBP12.03□□□□□ -0.48
CLCC1-201ENST00000302500 GPR179Q6PRD1 2367 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 SLC38A8A6NNN8 435 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 HEPACAM2A8MVW5 462 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 PSMC3P17980 439 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 PTPN1P18031 435 aaKnown RBP12.02□□□□□ -0.49
CLCC1-201ENST00000302500 PSMC2P35998 433 aaKnown RBP12.02□□□□□ -0.49
CLCC1-201ENST00000302500 GCLMP48507 274 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 MLLT6P55198 1093 aaPredicted RBP12.02□□□□□ -0.49
CLCC1-201ENST00000302500 NOP14P78316 857 aaKnown RBP12.02□□□□□ -0.49
CLCC1-201ENST00000302500 ADAM9Q13443 819 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CBWD6Q4V339 395 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 SLC44A4Q53GD3 710 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CBWD3Q5JTY5 395 aa12.02□□□□□ -0.49
CLCC1-201ENST00000302500 CBWD5Q5RIA9 395 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms