RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 MTMR2Q13614 643 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 CES4AQ5XG92 561 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 C3orf62Q6ZUJ4 267 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 SIAH1Q8IUQ4 282 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 PASD1Q8IV76 773 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 TAB3Q8N5C8 712 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-201ENST00000301475 ATP11CQ8NB49 1132 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 GSTCDQ8NEC7 633 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.41□□□□□ -0.58
ZNF558-201ENST00000301475 PYROXD1Q8WU10 500 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 TMEM174Q8WUU8 243 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 PYDC1Q8WXC3 89 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 POMGNT1Q8WZA1 660 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 SLITRK1Q96PX8 696 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 PLEKHG4BQ96PX9 1271 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 C10orf88Q9H8K7 445 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 PPARGC1AQ9UBK2 798 aaKnown RBP11.41□□□□□ -0.58
ZNF558-201ENST00000301475 DNAJB4Q9UDY4 337 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 FETUBQ9UGM5 382 aa11.41□□□□□ -0.58
ZNF558-201ENST00000301475 LOXHD1Q8IVV2 1947 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 hCG_2014768A0A024R1R8 64 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 ATP2A1O14983 1001 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 FAM200BP0CF97 657 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 PIM1P11309 404 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 NSFP46459 744 aaKnown RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 AQP4P55087 323 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 NFIAQ12857 509 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 GRM2Q14416 872 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 TMCO4Q5TGY1 634 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 LPCAT4Q643R3 524 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 DRICH1Q6PGQ1 229 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 CDHR3Q6ZTQ4 885 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 RASSF3Q86WH2 238 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 NME8Q8N427 588 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 FBXL13Q8NEE6 735 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 ALKBH8Q96BT7 664 aaKnown RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 APOPT1Q96IL0 206 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 MPP4Q96JB8 637 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 MECRQ9BV79 373 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 ZNF395Q9H8N7 513 aaPredicted RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 RAB20Q9NX57 234 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 ZDHHC7Q9NXF8 308 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 STRIP2Q9ULQ0 834 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 POLIQ9UNA4 740 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 SIPA1L1O43166 1804 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 VCPP55072 806 aaKnown RBP11.4□□□□□ -0.58
ZNF558-201ENST00000301475 PDE1BQ01064 536 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 DEUP1Q05D60 604 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 MAMLD1Q13495 774 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 ALCAMQ13740 583 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 SH2D5Q6ZV89 423 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 ZFPM1Q8IX07 1006 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 FBXO36Q8NEA4 188 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 FAM172AQ8WUF8 416 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 GPAMQ9HCL2 828 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 TMEM8AQ9HCN3 771 aa11.4□□□□□ -0.58
ZNF558-201ENST00000301475 TCRBV7S3A2A0A539 114 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 PGM3O95394 542 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 ARP10275 920 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 PEX2P28328 305 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 STIP1P31948 543 aaKnown RBP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 GDF10P55107 478 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 TXNRD3NBQ6F5E7 133 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 PRPF39Q86UA1 669 aaKnown RBP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 CPT1BQ92523 772 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 LENG1Q96BZ8 264 aaPredicted RBP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 PCDH9Q9HC56 1237 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 GINM1Q9NU53 330 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 RHBDL2Q9NX52 303 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 A0A088AWK7 358 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 SPECC1L-ADORA2AF8WAN1 911 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 SGK1O00141 431 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 DDX39AO00148 427 aaKnown RBP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 TMEM63AO94886 807 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 IL1BP01584 269 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 MT-ND3P03897 115 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 KRT1P04264 644 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 SERPINB2P05120 415 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 SMIM18P0DKX4 95 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 PHBP35232 272 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 GTF2IP78347 998 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 MED21Q13503 144 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 KLHL38Q2WGJ6 581 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 ZFYVE27Q5T4F4 411 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 C6orf163Q5TEZ5 329 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 SV2AQ7L0J3 742 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 HAUS6Q7Z4H7 955 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 MIS12Q9H081 205 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 S100A14Q9HCY8 104 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
ZNF558-201ENST00000301475 MARCOQ9UEW3 520 aaPredicted RBP11.39□□□□□ -0.59
ZNF558-201ENST00000301475 TAGLN3Q9UI15 199 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms