RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ADORA2BP29275 332 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 CETN2P41208 172 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 FAM187BQ17R55 369 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 GOLGA7BQ2TAP0 167 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 P3H1Q32P28 736 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 FAM47CQ5HY64 1035 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 PPP1R26Q5T8A7 1209 aaPredicted RBP15.36■□□□□ 0.05
SMG8-201ENST00000300917 ZIC5Q96T25 663 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 NFKBIZQ9BYH8 718 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 ADAMTS10Q9H324 1103 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 CDC42EP4Q9H3Q1 356 aaKnown RBP15.36■□□□□ 0.05
SMG8-201ENST00000300917 TBK1Q9UHD2 729 aa15.36■□□□□ 0.05
SMG8-201ENST00000300917 TCRBV5S1A1TA0A578 114 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 HMGB1P1B2RPK0 211 aaPredicted RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 TP73O15350 636 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 IZUMO3Q5VZ72 239 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 CD302Q8IX05 232 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 SCUBE3Q8IX30 993 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 EIF1ADQ8N9N8 165 aaKnown RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 ART4Q93070 314 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 EMID1Q96A84 441 aaPredicted RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 CTNNAL1Q9UBT7 734 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 PCDHGC3Q9UN70 934 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 PLXNB2O15031 1838 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 MYADML2A6NDP7 307 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 SLC15A5A6NIM6 579 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 SGK1O00141 431 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 PIAS1O75925 651 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 MMRN1Q13201 1228 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 LRIG3Q6UXM1 1119 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 ZNF467Q7Z7K2 595 aaPredicted RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 SNF8Q96H20 258 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 TXLNGYQ9BZA5 131 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 AAASQ9NRG9 546 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMG8-201ENST00000300917 SIP14410 1827 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 E7EVH7 732 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 NDUFAB1O14561 156 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 TNPO2O14787 897 aaKnown RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMG8-201ENST00000300917 GPR32O75388 356 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 P4HA1P13674 534 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 MLXIPLQ9NP71 852 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 NGRNQ9NPE2 291 aaKnown RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 SLC5A4Q9NY91 659 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 BARX2Q9UMQ3 279 aaPredicted RBP15.35■□□□□ 0.05
SMG8-201ENST00000300917 PLXNA1Q9UIW2 1896 aa15.35■□□□□ 0.05
SMG8-201ENST00000300917 RIPK2O43353 540 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 CST8O60676 142 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 BANF1O75531 89 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 PGK1P00558 417 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 GPD2P43304 727 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 RABGGTBP53611 331 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 BYSLQ13895 437 aaKnown RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 C12orf50Q8NA57 414 aaPredicted RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 CFAP57Q96MR6 1250 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 NT5C1AQ9BXI3 368 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 CALCOCO1Q9P1Z2 691 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 NME7Q9Y5B8 376 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 MEIS3P2A8K0S8 358 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 LSP1P33241 339 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 ARSEP51690 589 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 MYO1EQ12965 1108 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 GPS1Q13098 491 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 PPP1R15BQ5SWA1 713 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 RCOR2Q8IZ40 523 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 CNPY4Q8N129 248 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 KCTD6Q8NC69 237 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 ZFP42Q96MM3 310 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 AP5M1Q9H0R1 490 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 GNEQ9Y223 722 aaKnown RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 SLC45A1Q9Y2W3 748 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 LOC102724159A0A0B4J2E5 919 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 A6NJR5 290 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 RGS16O15492 202 aaPredicted RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 ZNF865P0CJ78 1059 aaPredicted RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 CCDC130P13994 396 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 LMO2P25791 158 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 IVDP26440 423 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 MIPP30301 263 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 PSEN2P49810 448 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 DRG2P55039 364 aaKnown RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 PIGHQ14442 188 aaPredicted RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 PWP2Q15269 919 aaKnown RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 PMF1Q6P1K2 205 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 KDM7AQ6ZMT4 941 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 FAM183BPQ6ZVS7 135 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 MGARPQ8TDB4 240 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 RBM41Q96IZ5 413 aaKnown RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 ZNF518BQ9C0D4 1074 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 ARHGAP39Q9C0H5 1083 aa15.34■□□□□ 0.05
SMG8-201ENST00000300917 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
SMG8-201ENST00000300917 SIGLEC16A6NMB1 481 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 A8MXQ7 604 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 F2P00734 622 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 PDGFRAP16234 1089 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 GRM5P41594 1212 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 TWF2Q6IBS0 349 aaKnown RBP15.33■□□□□ 0.04
SMG8-201ENST00000300917 NOTUMQ6P988 496 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms