RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 VMP1Q96GC9 406 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MAGED4Q96JG8 741 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 VCPKMTQ9H867 229 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RNF112Q9ULX5 631 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TBX20Q9UMR3 447 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GTF2A1LQ9UNN4 478 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 WEE1P30291 646 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CYP2C19P33261 490 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 HSD17B3P37058 310 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CDH18Q13634 790 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CAAP1Q9H8G2 361 aa14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
CHRFAM7A-201ENST00000299847 HEATR9A2RTY3 570 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FAM200BP0CF97 657 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DGKDQ16760 1214 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NUDT18Q6ZVK8 323 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PPIL6Q8IXY8 311 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PAWRQ96IZ0 340 aaKnown RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DNAJC7Q99615 494 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CELF2O95319 508 aaKnown RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TIPINQ9BVW5 301 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PIH1D1Q9NWS0 290 aaKnown RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DDIT4Q9NX09 232 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 LRRC34Q8IZ02 419 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SNRNP27Q8WVK2 155 aaKnown RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 THUMPD3Q9BV44 507 aaKnown RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CEP41Q9BYV8 373 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NIF3L1Q9GZT8 377 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 UBP1Q9NZI7 540 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CRB1P82279 1406 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TGM2P21980 687 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MAP3K7CLP57077 242 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 HPCAP84074 193 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CHMP1BQ7LBR1 199 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ARID3BQ8IVW6 561 aaPredicted RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 HAO1Q9UJM8 370 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CAB39Q9Y376 341 aaPredicted RBP14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KRT87PA6NCN2 255 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MSH4O15457 936 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZNF614Q8N883 585 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PCDHB2Q9Y5E7 798 aa14.1□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KRT8P05787 483 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TDRD10Q5VZ19 366 aaKnown RBP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GLB1LQ6UWU2 654 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 AGGF1Q8N302 714 aaeCLIP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PCYOX1LQ8NBM8 494 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TPCN2Q8NHX9 752 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ERP44Q9BS26 406 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZFYVE28Q9HCC9 887 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MED24O75448 989 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MLNP12872 115 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 DNAJC9Q8WXX5 260 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PARK7Q99497 189 aaKnown RBP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SLC40A1Q9NP59 571 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 MTO1Q9Y2Z2 717 aaKnown RBP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 TMEM253P0C7T8 217 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CHI3L1P36222 383 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RFC5P40937 340 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SERPINB4P48594 390 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CLCN3P51790 818 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CUL2Q13617 745 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ACAD10Q6JQN1 1059 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 VN1R5Q7Z5H4 357 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 FBXO36Q8NEA4 188 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 STAMBPL1Q96FJ0 436 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NSL1Q96IY1 281 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PDLIM2Q96JY6 352 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ECSITQ9BQ95 431 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 BBS2Q9BXC9 721 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CHST12Q9NRB3 414 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IGSF9BQ9UPX0 1349 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SSU72P8A0A1W2PR75 194 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SUPT7LO94864 414 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RALBP11234 206 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PON1P27169 355 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 AGBL2Q5U5Z8 902 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ZNF786Q8N393 782 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CMTM5Q96DZ9 223 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 SCUBE2Q9NQ36 999 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 RNF103O00237 685 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KLHL2O95198 593 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 CPSF4O95639 269 aaKnown RBP14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 PCNAP12004 261 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ITGB6P18564 788 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ERVK-24P63145 666 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 UGP2Q16851 508 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 C11orf63Q6NUN7 778 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 BNIPLQ7Z465 357 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 KCNK16Q96T55 309 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 GRID1Q9ULK0 1009 aa14.09□□□□□ -0.15
CHRFAM7A-201ENST00000299847 ABCA8O94911 1581 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 IQCA1LA6NCM1 817 aa14.08□□□□□ -0.15
CHRFAM7A-201ENST00000299847 AP1G2O75843 785 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms