RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 DENND1AQ8TEH3 1009 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 PRCCQ92733 491 aaPredicted RBP20.79■□□□□ 0.92
NFIL3-201ENST00000297689 MAGEB18Q96M61 343 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 CPXM1Q96SM3 734 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 MPHOSPH6Q99547 160 aaKnown RBP20.79■□□□□ 0.92
NFIL3-201ENST00000297689 TMEM121Q9BTD3 319 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 FRMD8P1Q9BZ68 369 aaPredicted RBP20.79■□□□□ 0.92
NFIL3-201ENST00000297689 PHACTR1Q9C0D0 580 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 SMARCAD1Q9H4L7 1026 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 VRTNQ9H8Y1 702 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 IFT122Q9HBG6 1241 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 CXCL8P10145 99 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 GABRB2P47870 512 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 MKRN3Q13064 507 aaKnown RBP20.79■□□□□ 0.92
NFIL3-201ENST00000297689 NR1H3Q13133 447 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 GALNTL6Q49A17 601 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 ARHGEF18Q6ZSZ5 1173 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 CDR2LQ86X02 465 aaPredicted RBP20.79■□□□□ 0.92
NFIL3-201ENST00000297689 ANKRD42Q8N9B4 389 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 SLC4A11Q8NBS3 891 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 DYDC1Q8WWB3 177 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 SGSM3Q96HU1 749 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 SPATA33Q96N06 139 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 HAUS2Q9NVX0 235 aa20.79■□□□□ 0.92
NFIL3-201ENST00000297689 NXF1Q9UBU9 619 aaKnown RBP20.79■□□□□ 0.92
NFIL3-201ENST00000297689 INO80B-WBP1J3KQ70 363 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 NDC80O14777 642 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 MED7O43513 233 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 PSMA2P25787 234 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 RAP1GAPP47736 663 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 WDR4P57081 412 aaKnown RBP20.78■□□□□ 0.92
NFIL3-201ENST00000297689 OSTNP61366 133 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 ZNF268Q14587 947 aaPredicted RBP20.78■□□□□ 0.92
NFIL3-201ENST00000297689 AMHR2Q16671 573 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 ZFYVE27Q5T4F4 411 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 CGB2Q6NT52 195 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 EFCAB12Q6NXP0 572 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 CYB5D1Q6P9G0 228 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 IFNLR1Q8IU57 520 aaPredicted RBP20.78■□□□□ 0.92
NFIL3-201ENST00000297689 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
NFIL3-201ENST00000297689 NLRP4Q96MN2 994 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 INO80BQ9C086 356 aaPredicted RBP20.78■□□□□ 0.92
NFIL3-201ENST00000297689 UBN1Q9NPG3 1134 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 ABCF3Q9NUQ8 709 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 WDR35Q9P2L0 1181 aa20.78■□□□□ 0.92
NFIL3-201ENST00000297689 C22orf31O95567 290 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 NFICP08651 508 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 KRT7P08729 469 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 KDELR1P24390 212 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 CLCN3P51790 818 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 CDH8P55286 799 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 ZNF667Q5HYK9 610 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 NUGGCQ68CJ6 796 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 LINC01465Q8N7H1 131 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 CMASQ8NFW8 434 aaPredicted RBP20.77■□□□□ 0.92
NFIL3-201ENST00000297689 ACTL9Q8TC94 416 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 ZBTB10Q96DT7 871 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 MCRS1Q96EZ8 462 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 ZNF668Q96K58 619 aaPredicted RBP20.77■□□□□ 0.92
NFIL3-201ENST00000297689 RPF1Q9H9Y2 349 aaKnown RBP20.77■□□□□ 0.92
NFIL3-201ENST00000297689 MLXIPLQ9NP71 852 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 RASA4BC9J798 803 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 RASA4O43374 803 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 CILPO75339 1184 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 TAC1P20366 129 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 MAP1SQ66K74 1059 aaPredicted RBP20.77■□□□□ 0.92
NFIL3-201ENST00000297689 PPP1R21Q6ZMI0 780 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 HAUS1Q96CS2 278 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 MS4A4AQ96JQ5 239 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 ELOVL4Q9GZR5 314 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 ZNF408Q9H9D4 720 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 RRAGCQ9HB90 399 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.77■□□□□ 0.92
NFIL3-201ENST00000297689 EVPLQ92817 2033 aa20.77■□□□□ 0.92
NFIL3-201ENST00000297689 LOC102724159A0A0B4J2E5 919 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 EXOC1LA0A1B0GW35 172 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 LACTBL1A8MY62 500 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 GOLGA8SH3BPF8 625 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 MAGEB2O15479 319 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 PRPF4O43172 522 aaKnown RBP eCLIP20.76■□□□□ 0.911e-6■■■■□ 21
NFIL3-201ENST00000297689 MGRN1O60291 552 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 ASMTLO95671 621 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 ERBB2P04626 1255 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 TXNP10599 105 aaKnown RBP20.76■□□□□ 0.91
NFIL3-201ENST00000297689 CD19P15391 556 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 FOXN2P32314 431 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 PSMC1P62191 440 aaKnown RBP20.76■□□□□ 0.91
NFIL3-201ENST00000297689 OTUD4Q01804 1114 aaKnown RBP20.76■□□□□ 0.91
NFIL3-201ENST00000297689 PWP2Q15269 919 aaKnown RBP20.76■□□□□ 0.91
NFIL3-201ENST00000297689 TMEM130Q8N3G9 435 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 TTC13Q8NBP0 860 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 RNPEPQ9H4A4 650 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 PPCSQ9HAB8 311 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 ZMYND8Q9ULU4 1186 aaPredicted RBP20.76■□□□□ 0.91
NFIL3-201ENST00000297689 CLEC11AQ9Y240 323 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 PLXNA1Q9UIW2 1896 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 FAM47DPA6NHR8 397 aa20.76■□□□□ 0.91
NFIL3-201ENST00000297689 ATP2C2O75185 946 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms