RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ITIH5Q86UX2 942 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 LSM14AQ8ND56 463 aaKnown RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ALKBH8Q96BT7 664 aaKnown RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 C6orf62Q9GZU0 229 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 EFCAB5A4FU69 1503 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 KDM5DQ9BY66 1539 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GTPBP10A4D1E9 387 aaKnown RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 KRT87PA6NCN2 255 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 DCDC2CA8MYV0 355 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 MIF4GDA9UHW6 222 aaKnown RBP12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GNAZP19086 355 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 GNA12Q03113 381 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ERICH5Q6P6B1 374 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 BNIPLQ7Z465 357 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 DEPDC4Q8N2C3 294 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 PROX1Q92786 737 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 MYL10Q9BUA6 226 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 TRIM8Q9BZR9 551 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 HESX1Q9UBX0 185 aa12.2□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ABL1P00519 1130 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 CYP21A2P08686 494 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 GARTP22102 1010 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 F8A1P23610 371 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 GTF2H1P32780 548 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ABCG1P45844 678 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 PPP2R2BQ00005 443 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 TRAP1Q12931 704 aaKnown RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 C6orf10Q5SRN2 563 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 GINS4Q9BRT9 223 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 COPS7BQ9H9Q2 264 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 GJB4Q9NTQ9 266 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ING3Q9NXR8 418 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 CABP1Q9NZU7 370 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ZBTB5O15062 677 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 PDE9AO76083 593 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 CDC27P30260 824 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 SEPHS1P49903 392 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 AQP4P55087 323 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 INHBCP55103 352 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 NCOA4Q13772 614 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 RFWD3Q6PCD5 774 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 DEFB107AQ8IZN7 70 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 C12orf50Q8NA57 414 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 MIGA1Q8NAN2 632 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 SPATA18Q8TC71 538 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 RSAD2Q8WXG1 361 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 STARD7Q9NQZ5 370 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 RNF113AO15541 343 aaKnown RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ALBP02768 609 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 CES1P23141 567 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 VBP1P61758 197 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 KRT17Q04695 432 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ARL6IP4Q66PJ3 421 aaKnown RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 SIGIRRQ6IA17 410 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ZNF544Q6NX49 715 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ZFP1Q6P2D0 407 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 KRT74Q7RTS7 529 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 ZSWIM2Q8NEG5 633 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 FAM149B1Q96BN6 582 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 CXorf21Q9HAI6 301 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 KIF17Q9P2E2 1029 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
SNIP1-201ENST00000296215 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
SNIP1-201ENST00000296215 PNMA8CA0A1B0GUJ8 204 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HSPA4LO95757 839 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 CDH1P12830 882 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 NELFEP18615 380 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 ATP2B4P23634 1241 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HOXD13P35453 343 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HADHAP40939 763 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 GARSP41250 739 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 RBM20Q5T481 1227 aaKnown RBP12.18□□□□□ -0.46
SNIP1-201ENST00000296215 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 G2E3Q7L622 706 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 C7orf57Q8NEG2 295 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TMEM246Q9BRR3 403 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TEX12Q9BXU0 123 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 KLHL31Q9H511 634 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 MAGEE1Q9HCI5 957 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 HPS4Q9NQG7 708 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 SACM1LQ9NTJ5 587 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 TEX14Q8IWB6 1497 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 MAST3O60307 1309 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 RAB19A4D1S5 217 aa12.18□□□□□ -0.46
SNIP1-201ENST00000296215 H0YJX3 145 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms