RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PKDCCQ504Y2 493 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 DENND1BQ6P3S1 775 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 FAM43BQ6ZT52 329 aaPredicted RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 UNC93AQ86WB7 457 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 KATNAL2Q8IYT4 538 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 C3orf20Q8ND61 904 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 MCEEQ96PE7 176 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 FMO2Q99518 471 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 OSBPL7Q9BZF2 842 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 SYNCQ9H7C4 482 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 AGO3Q9H9G7 860 aaKnown RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 HOMER3Q9NSC5 361 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 FAM105AQ9NUU6 356 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 PSD3Q9NYI0 1048 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 FEZ2Q9UHY8 353 aaPredicted RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 CYTH4Q9UIA0 394 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 TANC1Q9C0D5 1861 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 TCRBV7S2A1N4TA0A589 114 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 GOLGA6CA6NDK9 693 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 O00370 1275 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 ECEL1O95672 775 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 GOLGA6DP0CG33 693 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 PTGIRP43119 386 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 RPL7AP62424 266 aaKnown RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 SOX4Q06945 474 aaPredicted RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 ODF2Q5BJF6 829 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 ZFYVE27Q5T4F4 411 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 LCLAT1Q6UWP7 414 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 ZDHHC14Q8IZN3 488 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 EXD1Q8NHP7 514 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 HMX1Q9NP08 348 aaPredicted RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 GOLGA6AQ9NYA3 693 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 WDR35Q9P2L0 1181 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 GIT1Q9Y2X7 761 aa9.66□□□□□ -0.86
PDPN-201ENST00000294489 GRK4P32298 578 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 RAB27AP51159 221 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 NDST1P52848 882 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 STILQ15468 1287 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 SIX1Q15475 284 aaPredicted RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 SOWAHAQ2M3V2 549 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 TTC27Q6P3X3 843 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 NIPA2Q8N8Q9 360 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 FAM76AQ8TAV0 307 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 ZNF560Q96MR9 790 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 NEUROG2Q9H2A3 272 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 A0A1W2PQ45 241 aaPredicted RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 A0A1W2PQY0 241 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 GOLGA6L10A6NI86 522 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 GJB6O95452 261 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 PFKMP08237 780 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 GJC1P36383 396 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 THPOP40225 353 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 CDK7P50613 346 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 TAS2R40P59535 323 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 LLGL1Q15334 1064 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 PPP1R7Q15435 360 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 LRRC38Q5VT99 294 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 ARHGAP17Q68EM7 881 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 TWF2Q6IBS0 349 aaKnown RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 CRYBG2Q8N1P7 616 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 KBTBD7Q8WVZ9 684 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 RBM41Q96IZ5 413 aaKnown RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 MRPL45Q9BRJ2 306 aaKnown RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 NT5C1AQ9BXI3 368 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 TRMT13Q9NUP7 481 aaKnown RBP9.65□□□□□ -0.86
PDPN-201ENST00000294489 PADI3Q9ULW8 664 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 PTPN22Q9Y2R2 807 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 SNX24Q9Y343 169 aa9.65□□□□□ -0.86
PDPN-201ENST00000294489 HTTP42858 3142 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 COL4A4P53420 1690 aaPredicted RBP9.65□□□□□ -0.87
PDPN-201ENST00000294489 SPTLC1O15269 473 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 MGEA5O60502 916 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 MICAL2O94851 1124 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 KRT3P12035 628 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 HSD17B3P37058 310 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 GPD2P43304 727 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 RPL34P49207 117 aaKnown RBP9.65□□□□□ -0.87
PDPN-201ENST00000294489 LMAN1P49257 510 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.87
PDPN-201ENST00000294489 PTPN20Q4JDL3 420 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 CYP4A22Q5TCH4 519 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 DAB2IPQ5VWQ8 1189 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 LRIG3Q6UXM1 1119 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 DPH6Q7L8W6 267 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 RCOR2Q8IZ40 523 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 UBLCP1Q8WVY7 318 aaPredicted RBP9.65□□□□□ -0.87
PDPN-201ENST00000294489 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.65□□□□□ -0.87
PDPN-201ENST00000294489 MTRF1LQ9UGC7 380 aaKnown RBP9.65□□□□□ -0.87
PDPN-201ENST00000294489 PLAAQ9Y263 795 aa9.65□□□□□ -0.87
PDPN-201ENST00000294489 SIGLEC16A6NMB1 481 aa9.64□□□□□ -0.87
PDPN-201ENST00000294489 RALAP11233 206 aa9.64□□□□□ -0.87
PDPN-201ENST00000294489 WARSP23381 471 aaKnown RBP9.64□□□□□ -0.87
PDPN-201ENST00000294489 PLTPP55058 493 aa9.64□□□□□ -0.87
PDPN-201ENST00000294489 PSMC1P62191 440 aaKnown RBP9.64□□□□□ -0.87
PDPN-201ENST00000294489 ORC1Q13415 861 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms