RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ST13P5Q8NFI4 369 aaPredicted RBP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 ZNF669Q96BR6 464 aaPredicted RBP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 ISCUQ9H1K1 167 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 SPASTQ9UBP0 616 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 TRIM49D1C9J1S8 452 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 POU4F1Q01851 419 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 KCNB1Q14721 858 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 LLGL2Q6P1M3 1020 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 DAPK2Q9UIK4 370 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 BLOC1S6Q9UL45 172 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 NR5A2O00482 541 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 CPSF4O95639 269 aaKnown RBP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 STAT5BP51692 787 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 C2orf69Q8N8R5 385 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 MKNK1Q9BUB5 465 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 SYBUQ9NX95 663 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 RNF112Q9ULX5 631 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 SLC30A1Q9Y6M5 507 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 PRR23AA6NEV1 266 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 MFN2O95140 757 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 SGPL1O95470 568 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 KRT16P08779 473 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 ATP6V1B2P21281 511 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 ARL4DP49703 201 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 EMC2Q15006 297 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 EPHA7Q15375 998 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 MGAT5BQ3V5L5 792 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 VMP1Q96GC9 406 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 ZNF609O15014 1411 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 AP1G2O75843 785 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 RASSF9O75901 435 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 HPCAP84074 193 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 DDX39BQ13838 428 aaKnown RBP16.75■□□□□ 0.27
SSRP1-202ENST00000293880 USP49Q70CQ1 688 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
SSRP1-202ENST00000293880 MAGEA13PA6NCF6 341 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 GSSP48637 474 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 PGBD3Q8N328 593 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 DMAP1Q9NPF5 467 aaPredicted RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 IPPQ9Y573 584 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 HLA-DRAP01903 254 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 SPRP35270 261 aaPredicted RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 ARHGEF7Q14155 803 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 TAF5Q15542 800 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 ERLEC1Q96DZ1 483 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 IARS2Q9NSE4 1012 aaKnown RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 DUSP10Q9Y6W6 482 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 ITIH6Q6UXX5 1313 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 PSMA4P25789 261 aaKnown RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 KCNT1Q5JUK3 1230 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 PPIL6Q8IXY8 311 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 DDX18Q9NVP1 670 aaKnown RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 PRG3Q9Y2Y8 225 aaPredicted RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 RALBP11234 206 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 NCAM1P13591 858 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 KLRC1P26715 233 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 POU1F1P28069 291 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 USP11P51784 963 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 VEPH1Q14D04 833 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
SSRP1-202ENST00000293880 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 RMI1Q9H9A7 625 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 GPATCH2LQ9NWQ4 482 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 CYBBP04839 570 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 SCTRP47872 440 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 KCNMA1Q12791 1236 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 C7orf25Q9BPX7 421 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 TMEM120AQ9BXJ8 343 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 WWOXQ9NZC7 414 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 WDR19Q8NEZ3 1342 aa16.74■□□□□ 0.27
SSRP1-202ENST00000293880 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 C2CD2LO14523 706 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CDC25CP30307 473 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 RAD51Q06609 339 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 NFIL3Q16649 462 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 FBXO36Q8NEA4 188 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 TFB1MQ8WVM0 346 aaKnown RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 SEMA4DQ92854 862 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CENPTQ96BT3 561 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 GPR63Q9BZJ6 419 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CYLDQ9NQC7 956 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 E9PBE3 544 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 KLHL41O60662 606 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 PMPCBO75439 489 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 RSBN1Q5VWQ0 802 aaPredicted RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 SGSM3Q96HU1 749 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
SSRP1-202ENST00000293880 NPTXRO95502 500 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 ATP12AP54707 1039 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 CORO7P57737 925 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 TMEM165Q9HC07 324 aa16.73■□□□□ 0.27
SSRP1-202ENST00000293880 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms