RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 NDRG2Q9UN36 371 aaKnown RBP11.21□□□□□ -0.61
SNF8-201ENST00000290330 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.61
SNF8-201ENST00000290330 R4GN57 208 aa11.21□□□□□ -0.61
SNF8-201ENST00000290330 TCHHQ07283 1943 aa11.21□□□□□ -0.62
SNF8-201ENST00000290330 FAM237AA0A1B0GTK4 181 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 SOBPA7XYQ1 873 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 NOL4O94818 638 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 MYL1P05976 194 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 FAM163BP0C2L3 166 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 CCNE1P24864 410 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 CASP4P49662 377 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 NDUFA8P51970 172 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
SNF8-201ENST00000290330 ZNF528Q3MIS6 628 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 CELF5Q8N6W0 485 aaKnown RBP11.2□□□□□ -0.62
SNF8-201ENST00000290330 MAB21L3Q8N8X9 362 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 GOLGA5Q8TBA6 731 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 BPIFB1Q8TDL5 484 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 TMEM174Q8WUU8 243 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 ZFYVE19Q96K21 471 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 MYRFLQ96LU7 910 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 MRPL45Q9BRJ2 306 aaKnown RBP11.2□□□□□ -0.62
SNF8-201ENST00000290330 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
SNF8-201ENST00000290330 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 SEMA4AQ9H3S1 761 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 CRTAC1Q9NQ79 661 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 ZMYM5Q9UJ78 669 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 FBXO4Q9UKT5 387 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
SNF8-201ENST00000290330 CACNA1IQ9P0X4 2223 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 COL4A2P08572 1712 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 SLC38A8A6NNN8 435 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 TACC1O75410 805 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 TADA3O75528 432 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 STAU1O95793 577 aaKnown RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 DDX6P26196 483 aaKnown RBP eCLIP11.19□□□□□ -0.623e-6■□□□□ 10
SNF8-201ENST00000290330 AVPR1AP37288 418 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 MAGEA11P43364 429 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 SYKP43405 635 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 SOX9P48436 509 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 KPNA1P52294 538 aaPredicted RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 MYL6P60660 151 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 CLDN10P78369 228 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 CSTF1Q05048 431 aaKnown RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 MTAPQ13126 283 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 MAPRE1Q15691 268 aaKnown RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 WDR72Q3MJ13 1102 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 TXNDC8Q6A555 127 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 ZC3H14Q6PJT7 736 aaKnown RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 C4orf50Q6ZRC1 276 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 MON1AQ86VX9 555 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 SLC9A9Q8IVB4 645 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 SCN4BQ8IWT1 228 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 PARD3BQ8TEW8 1205 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 MRPS31Q92665 395 aaKnown RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 MYLPFQ96A32 169 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 TRMT2BQ96GJ1 504 aaKnown RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 MSANTD3Q96H12 275 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 XYLT2Q9H1B5 865 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 CHRDQ9H2X0 955 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 C8orf33Q9H7E9 229 aaPredicted RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 LMAN1LQ9HAT1 526 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 GTSE1Q9NYZ3 720 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 UXTQ9UBK9 157 aaPredicted RBP11.19□□□□□ -0.62
SNF8-201ENST00000290330 NME7Q9Y5B8 376 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 F5P12259 2224 aa11.19□□□□□ -0.62
SNF8-201ENST00000290330 MIA3Q5JRA6 1907 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 A0A1W2PQ27 194 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 A0A1W2PQ64 194 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 A0A1W2PQD8 194 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 SPECC1L-ADORA2AF8WAN1 911 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 PDXKO00764 312 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 LMNAP02545 664 aaKnown RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 RPN1P04843 607 aaKnown RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 CHRNB1P11230 501 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 BDNFP23560 247 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 ATICP31939 592 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 CTHP32929 405 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 GNL1P36915 607 aaPredicted RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 AP3M2P53677 418 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 TNNC1P63316 161 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 CYP27A1Q02318 531 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 TNK2Q07912 1038 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 TRPC3Q13507 836 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 C1orf228Q6PIY5 440 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 TSSK4Q6SA08 328 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
SNF8-201ENST00000290330 RALGPS2Q86X27 583 aaPredicted RBP11.18□□□□□ -0.62
SNF8-201ENST00000290330 ADSSL1Q8N142 457 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms