RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ENOSF1Q7L5Y1 443 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PABPC3Q9H361 631 aaKnown RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 SRRDQ9UH36 339 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 STRIP2Q9ULQ0 834 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 A8MXQ7 604 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SYF2O95926 243 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 INHAP05111 366 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 PMS1P54277 932 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 GRIN1Q05586 938 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 OR6B2Q6IFH4 312 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 CXCL17Q6UXB2 119 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 GALNT4Q8N4A0 578 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 ANKRD27Q96NW4 1050 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 C7orf25Q9BPX7 421 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SH2D3AQ9BRG2 576 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 NFASCO94856 1347 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SYCE1LA8MT33 242 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 UBA1P22314 1058 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 DSG1Q02413 1049 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 ELAVL2Q12926 359 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 NAB2Q15742 525 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 ENTPD7Q9NQZ7 604 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 STX18Q9P2W9 335 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 MARCOQ9UEW3 520 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 C2CD2Q9Y426 696 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 PI4K2BG5E9Z4 385 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 GALCP54803 685 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SNX17Q15036 470 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 TEDDM1Q5T9Z0 273 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 ATP11CQ8NB49 1132 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 NUP85Q9BW27 656 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 MCM8Q9UJA3 840 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 MAGED2Q9UNF1 606 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SYNJ2BP-COX16A0A087WUM0 186 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 PPP1R3GB7ZBB8 358 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 SEPT4O43236 478 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 PHF2O75151 1096 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 NMT1P30419 496 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 DUSP28Q4G0W2 176 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 COX16Q9P0S2 106 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
NPC1L1-201ENST00000289547 PRRG1O14668 218 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 XPAP23025 273 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 PCSK1P29120 753 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 PRKCZQ05513 592 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 KCTD6Q8NC69 237 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 PARD3BQ8TEW8 1205 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 SLC5A5Q92911 643 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 MID2Q9UJV3 735 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 C5P01031 1676 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 ZSCAN5CA6NGD5 496 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 SLC16A3O15427 465 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 RALAP11233 206 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 PRLRP16471 622 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 DNAAF3Q8N9W5 541 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 FAF2Q96CS3 445 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 RBM15Q96T37 977 aaKnown RBP eCLIP11.87□□□□□ -0.516e-6■■■■□ 20.3
NPC1L1-201ENST00000289547 TRIM9Q9C026 710 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 RPTORQ8N122 1335 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 ARHGEF9O43307 516 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 KRT8P05787 483 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 URODP06132 367 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 CCDC159P0C7I6 412 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 KCNJ1P48048 391 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 HDAC4P56524 1084 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 DAB2P98082 770 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 YTHDF3Q7Z739 585 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 EPS8L3Q8TE67 593 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 AGAP11Q8TF27 550 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 EME1Q96AY2 570 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 KCND1Q9NSA2 647 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 ZNF112Q9UJU3 913 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 VTNP04004 478 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 PECAM1P16284 738 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 GCLMP48507 274 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 STK4Q13043 487 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 ACAD11Q709F0 780 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 FTHL17Q9BXU8 183 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 METTL5Q9NRN9 209 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 PLIN4Q96Q06 1357 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
NPC1L1-201ENST00000289547 AHCYL1O43865 530 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms