RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GTSE1Q9NYZ3 720 aa10.23□□□□□ -0.77
HMHB1-201ENST00000289448 FBXO4Q9UKT5 387 aa10.23□□□□□ -0.77
HMHB1-201ENST00000289448 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
HMHB1-201ENST00000289448 MAGED2Q9UNF1 606 aaPredicted RBP10.23□□□□□ -0.77
HMHB1-201ENST00000289448 TCHHQ07283 1943 aa10.23□□□□□ -0.77
HMHB1-201ENST00000289448 TICRRQ7Z2Z1 1910 aa10.23□□□□□ -0.77
HMHB1-201ENST00000289448 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 DPYSL4O14531 572 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 NCAM2O15394 837 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 NOL4O94818 638 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 PDGFRBP09619 1106 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 TDGF1P13385 188 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 PFKFB1P16118 471 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 WARSP23381 471 aaKnown RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 HOXC13P31276 330 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 CASP4P49662 377 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 KPNA1P52294 538 aaPredicted RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 MLLT6P55198 1093 aaPredicted RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 MYO1EQ12965 1108 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 SURF1Q15526 300 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 KNOP1Q1ED39 458 aaKnown RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 CFAP221Q4G0U5 840 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 DPH6Q7L8W6 267 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 C12orf56Q8IXR9 622 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 CMTM8Q8IZV2 173 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 MAB21L3Q8N8X9 362 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 KIAA0895Q8NCT3 520 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 SPATA18Q8TC71 538 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 BPIFB1Q8TDL5 484 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 CSGALNACT1Q8TDX6 532 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 USP13Q92995 863 aaPredicted RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 CGRRF1Q99675 332 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 SYT15Q9BQS2 421 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 MRPL45Q9BRJ2 306 aaKnown RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 SEMA4AQ9H3S1 761 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 RBM12Q9NTZ6 932 aaKnown RBP10.22□□□□□ -0.77
HMHB1-201ENST00000289448 C2orf42Q9NWW7 574 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 UBE4BO95155 1302 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 FANCMQ8IYD8 2048 aa10.22□□□□□ -0.77
HMHB1-201ENST00000289448 PATJQ8NI35 1801 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 OTOL1A6NHN0 477 aaPredicted RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 SPECC1L-ADORA2AF8WAN1 911 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 LILRB5O75023 590 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CSH1P0DML2 217 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CSH2P0DML3 217 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 TNNI1P19237 187 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CMA1P23946 247 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 PCSK1P29120 753 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CTHP32929 405 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MAGEA11P43364 429 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MYL6P60660 151 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 SNRPFP62306 86 aaKnown RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 RPL10AP62906 217 aaKnown RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 ARHGAP29Q52LW3 1261 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 TRIM68Q6AZZ1 485 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 ZC3H14Q6PJT7 736 aaKnown RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MAMSTRQ6ZN01 415 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 Q6ZS52 159 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 HS2ST1Q7LGA3 356 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MON1AQ86VX9 555 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 SPATA2LQ8IUW3 424 aaPredicted RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 SCN4BQ8IWT1 228 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CEP57L1Q8IYX8 460 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 DCLK2Q8N568 766 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CELF5Q8N6W0 485 aaKnown RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 ZBTB44Q8NCP5 570 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MYLPFQ96A32 169 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 ELMO3Q96BJ8 720 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CHFRQ96EP1 664 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 TRMT2BQ96GJ1 504 aaKnown RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 FUBP3Q96I24 572 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MYRFLQ96LU7 910 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 FNBP1Q96RU3 617 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 SLC22A12Q96S37 553 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CYP2S1Q96SQ9 504 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 MMS19Q96T76 1030 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 FAM83CQ9BQN1 747 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 XYLT2Q9H1B5 865 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 C8orf33Q9H7E9 229 aaPredicted RBP10.21□□□□□ -0.77
HMHB1-201ENST00000289448 HPS4Q9NQG7 708 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 GKN1Q9NS71 199 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 TMEM30AQ9NV96 361 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 DMAC2Q9NW81 257 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 ZSCAN32Q9NX65 697 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 CDH9Q9ULB4 789 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 HPSEQ9Y251 543 aa10.21□□□□□ -0.77
HMHB1-201ENST00000289448 EXOC3O60645 756 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 ARSAP15289 507 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 BDNFP23560 247 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 GNL1P36915 607 aaPredicted RBP10.2□□□□□ -0.78
HMHB1-201ENST00000289448 AVPR1AP37288 418 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 NDUFA8P51970 172 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 CACNA2D1P54289 1103 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 USP46P62068 366 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 SATB1Q01826 763 aa10.2□□□□□ -0.78
HMHB1-201ENST00000289448 DMWDQ09019 674 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms