RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ENDOVQ8N8Q3 282 aaKnown RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 TMEM35BQ8NCS4 154 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 MZB1Q8WU39 189 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 MIPEPQ99797 713 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 OSBPL1AQ9BXW6 950 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 ZNF277Q9NRM2 450 aaPredicted RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 A0A0G2JND7 137 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 TCRBV7S3A2A0A539 114 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 CCDC189A1A4V9 331 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 E7ENQ6 273 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 MAFGO15525 162 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 LSM8O95777 96 aaKnown RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 MARK3P27448 753 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 BBS9Q3SYG4 887 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 KCNT1Q5JUK3 1230 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 SPDYAQ5MJ70 313 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 RFWD3Q6PCD5 774 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 WDTC1Q8N5D0 677 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 NAT8LQ8N9F0 302 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 DCAKDQ8WVC6 231 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 PTPRN2Q92932 1015 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 TLE6Q9H808 572 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 SAR1AQ9NR31 198 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 LNPEPQ9UIQ6 1025 aa13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 CORO1CQ9ULV4 474 aaPredicted RBP13.9□□□□□ -0.18
SLC28A1-201ENST00000286749 CST8O60676 142 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 PIGRP01833 764 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 GCKP35557 465 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 PTDSS1P48651 473 aaKnown RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 KLHL38Q2WGJ6 581 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 PALM2Q8IXS6 379 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 BANPQ8N9N5 519 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 ZNF398Q8TD17 642 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 PORCNQ9H237 461 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 MANSC1Q9H8J5 431 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 FETUBQ9UGM5 382 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 KAT6AQ92794 2004 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 WNT10BO00744 389 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 TM9SF1O15321 606 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 TMEM63AO94886 807 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 ATP4AP20648 1035 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 PSMA2P25787 234 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 PCK1P35558 622 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 TNFSF9P41273 254 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 NAMPTP43490 491 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 CCNHP51946 323 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 MYL6P60660 151 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 TGFB2P61812 414 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 SNRNP48Q6IEG0 339 aaKnown RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 LRRC6Q86X45 466 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 NIPA2Q8N8Q9 360 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 TFAP2BQ92481 460 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 MTMR12Q9C0I1 747 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 CISHQ9NSE2 258 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 GINM1Q9NU53 330 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 ARL8BQ9NVJ2 186 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 HEY2Q9UBP5 337 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 ADGRA2Q96PE1 1338 aa13.89□□□□□ -0.19
SLC28A1-201ENST00000286749 CFAP69A5D8W1 941 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 APBA3O96018 575 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 IL1R2P27930 398 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 RFC1P35251 1148 aaPredicted RBP13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 TAP1Q03518 808 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 CDCA2Q69YH5 1023 aaPredicted RBP13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 ZFATQ9P243 1243 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 STAM2O75886 525 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 HAUS5O94927 633 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 UPP2O95045 317 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 WEE2P0C1S8 567 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 SLC25A11Q02978 314 aaKnown RBP13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 ANO7Q6IWH7 933 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 C4orf50Q6ZRC1 276 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 ZBTB33Q86T24 672 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 UNC45BQ8IWX7 931 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 ARFGAP1Q8N6T3 406 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 JOSD2Q8TAC2 188 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 PRR11Q96HE9 360 aaPredicted RBP13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 TSSK1BQ9BXA7 367 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 TRIM55Q9BYV6 548 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 VPS11Q9H270 941 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 TJP2Q9UDY2 1190 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 KCNG1Q9UIX4 513 aa13.88□□□□□ -0.19
SLC28A1-201ENST00000286749 CHMP2BQ9UQN3 213 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms