RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 IRAK3Q9Y616 596 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 A0A087X0T9 212 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 SSU72P8A0A1W2PR75 194 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 FAM170AA1A519 330 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 HIDE1A8MVS5 230 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 VNN2O95498 520 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 CXCL14O95715 111 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 FAM228BP0C875 321 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 ARPP19P56211 112 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 TSPY1Q01534 308 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 PKDCCQ504Y2 493 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 LCLAT1Q6UWP7 414 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 TTC30AQ86WT1 665 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 ZNF677Q86XU0 584 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 TMTC1Q8IUR5 882 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 WDTC1Q8N5D0 677 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 MYLPFQ96A32 169 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 HNRNPABQ99729 332 aaKnown RBP23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 RXFP1Q9HBX9 757 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 TMEM30AQ9NV96 361 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 PCDHGC3Q9UN70 934 aa23.14■■□□□ 1.29
PDLIM3-203ENST00000284771 WDR27A2RRH5 827 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 RFXAPO00287 272 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 FSCN2O14926 492 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 TEX28O15482 410 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 MICAL2O94851 1124 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 CNPP09543 421 aaKnown RBP23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 ADORA2BP29275 332 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 ROR1Q01973 937 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 GPR17Q13304 367 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 PASD1Q8IV76 773 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 MRPL43Q8N983 215 aaKnown RBP23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 PGLYRP2Q96PD5 576 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 OXCT2Q9BYC2 517 aaPredicted RBP23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 PTPRDP23468 1912 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 BEST1O76090 585 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 CACNA2D1P54289 1103 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 CYP27A1Q02318 531 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 GFPT1Q06210 699 aaPredicted RBP23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 DENND1BQ6P3S1 775 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 RNF19BQ6ZMZ0 732 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 UBA3Q8TBC4 463 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 CCDC42Q96M95 316 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 ZNF518BQ9C0D4 1074 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 FNIP2Q9P278 1114 aa23.13■■□□□ 1.29
PDLIM3-203ENST00000284771 C2orf71A6NGG8 1288 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 ZNF263O14978 683 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 LPXNO60711 386 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 CPB1P15086 417 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 TNFAIP3P21580 790 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 GOLGA7BQ2TAP0 167 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 PLPP4Q5VZY2 271 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 DNAAF5Q86Y56 855 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 DCP1BQ8IZD4 617 aaKnown RBP23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 ATAD1Q8NBU5 361 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 GDPD5Q8WTR4 605 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 CRISPLD1Q9H336 500 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 ENTPD7Q9NQZ7 604 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 SPTLC3Q9NUV7 552 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 TAS2R14Q9NYV8 317 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 CYTH4Q9UIA0 394 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 ATG2AQ2TAZ0 1938 aa23.12■■□□□ 1.29
PDLIM3-203ENST00000284771 MYH10P35580 1976 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 TULP2O00295 520 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 MED7O43513 233 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 ABLIM3O94929 683 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 CYP1A1P04798 512 aaPredicted RBP23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 UNGP13051 313 aaPredicted RBP23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 GPD2P43304 727 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 KIF11P52732 1056 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 BMS1Q14692 1282 aaKnown RBP23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 ANKRD52Q8NB46 1076 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 NENFQ9UMX5 172 aa23.11■■□□□ 1.29
PDLIM3-203ENST00000284771 MTMR11A4FU01 709 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 BDNFP23560 247 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 CYP2F1P24903 491 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 RAB33AQ14088 237 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 STILQ15468 1287 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 MAPRE1Q15691 268 aaKnown RBP23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 SLC18A3Q16572 532 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 PRPF38BQ5VTL8 546 aaKnown RBP23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 FAM35AQ86V20 835 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 TTC9BQ8N6N2 239 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 CCDC112Q8NEF3 446 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 ZNF461Q8TAF7 563 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 MICAL1Q8TDZ2 1067 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 KLHL5Q96PQ7 755 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 KCNK16Q96T55 309 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 LHX5Q9H2C1 402 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 ZNF576Q9H609 170 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 SEPT11Q9NVA2 429 aaKnown RBP23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 SSX2IPQ9Y2D8 614 aa23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 EPN1Q9Y6I3 576 aaPredicted RBP23.1■■□□□ 1.29
PDLIM3-203ENST00000284771 M0QYV0 167 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 SOX1O00570 391 aaPredicted RBP23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 CA8P35219 290 aa23.09■■□□□ 1.29
PDLIM3-203ENST00000284771 SMC1AQ14683 1233 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms