RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PKDCCQ504Y2 493 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 ZNF280DQ6N043 979 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 SYT10Q6XYQ8 523 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 ANKS3Q6ZW76 656 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 SLC2A14Q8TDB8 520 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 PKMYT1Q99640 499 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 TSGA10Q9BZW7 698 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 UBE2OQ9C0C9 1292 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 CHST7Q9NS84 486 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 HESX1Q9UBX0 185 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 ANKRD62A6NC57 917 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 H7C4K7 107 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 SOD2P04179 222 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 GPD2P43304 727 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 RABGGTBP53611 331 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 PLCB3Q01970 1234 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 MAPRE1Q15691 268 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 CCDC142Q17RM4 750 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 CTXN3Q4LDR2 81 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 DDX53Q86TM3 631 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 FUKQ8N0W3 1084 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 ANKRD52Q8NB46 1076 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 C1orf131Q8NDD1 294 aaKnown RBP20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 UBA3Q8TBC4 463 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 PCED1BQ96HM7 432 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 TMEM209Q96SK2 561 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 OXCT2Q9BYC2 517 aaPredicted RBP20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 GUCA1BQ9UMX6 200 aa20.03■□□□□ 0.8
PDLIM3-202ENST00000284770 FAM170AA1A519 330 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 H0YGN5 161 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 ADORA2BP29275 332 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 GNG11P61952 73 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 PAQR9Q6ZVX9 377 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 LRRTM3Q86VH5 581 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 TTC30AQ86WT1 665 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 PHF13Q86YI8 300 aaPredicted RBP20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 WDR24Q96S15 920 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 B3GNT5Q9BYG0 378 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 ZCWPW1Q9H0M4 648 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 MYO1AQ9UBC5 1043 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 STK39Q9UEW8 545 aa20.02■□□□□ 0.8
PDLIM3-202ENST00000284770 OR6C75A6NL08 312 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 KIF5CO60282 957 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 TBC1D4O60343 1298 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 FGF18O76093 207 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 TMEM253P0C7T8 217 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 KRT17Q04695 432 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 KIAA1841Q6NSI8 718 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 SECISBP2LQ93073 1101 aaKnown RBP20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 CYTH4Q9UIA0 394 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 VWA8A3KMH1 1905 aa20.01■□□□□ 0.79
PDLIM3-202ENST00000284770 LINC01553A4QN01 128 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 GRXCR1A8MXD5 290 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 ABCB4P21439 1286 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 MMP8P22894 467 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 BMPR1AP36894 532 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 BCAT1P54687 386 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 FAM109BQ6ICB4 259 aaPredicted RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 MON1BQ7L1V2 547 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 DCP1BQ8IZD4 617 aaKnown RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 MCOLN2Q8IZK6 566 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 CTNNBL1Q8WYA6 563 aaPredicted RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 PIK3R5Q8WYR1 880 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 VCPIP1Q96JH7 1222 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 MED10Q9BTT4 135 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 HERC2P3Q9BVR0 1158 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 THAP2Q9H0W7 228 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 TMLHEQ9NVH6 421 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 DNAI1Q9UI46 699 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 SALL4Q9UJQ4 1053 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 RWDD3Q9Y3V2 267 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 CLDN5O00501 218 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 SETSIPP0DME0 302 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 DSG1Q02413 1049 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 BST2Q10589 180 aaKnown RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 PRSS55Q6UWB4 352 aaPredicted RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 ERICH1Q86X53 443 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 SLC35F5Q8WV83 523 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 RIN2Q8WYP3 895 aaPredicted RBP20■□□□□ 0.79
PDLIM3-202ENST00000284770 MYLPFQ96A32 169 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 NOX5Q96PH1 765 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 DUSP16Q9BY84 665 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 ADAM22Q9P0K1 906 aa20■□□□□ 0.79
PDLIM3-202ENST00000284770 KIAA1671Q9BY89 1806 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 BTNL10A8MVZ5 291 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 CAPN15O75808 1086 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 OR4Q2P0C623 313 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 MYOGP15173 224 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 SLC8A3P57103 927 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 GPC5P78333 572 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 PDE4CQ08493 712 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 PTP4A2Q12974 167 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 SLC39A12Q504Y0 691 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 ZNF569Q5MCW4 686 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 VPS52Q8N1B4 723 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 KLHL23Q8NBE8 558 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 KIF18AQ8NI77 898 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 STK32AQ8WU08 396 aa19.99■□□□□ 0.79
PDLIM3-202ENST00000284770 ZNF592Q92610 1267 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms