RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 JRKLQ9Y4A0 524 aa14.08□□□□□ -0.16
ACER3-201ENST00000278544 PRRC2BQ5JSZ5 2229 aaKnown RBP14.08□□□□□ -0.16
ACER3-201ENST00000278544 F8VP50 259 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 PI4K2BG5E9Z4 385 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 MYO1FO00160 1098 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 NRP1O14786 923 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 BDNFP23560 247 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 RBM10P98175 930 aaKnown RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 ELF2Q15723 593 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 KCNT1Q5JUK3 1230 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 TAS1R1Q7RTX1 841 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 AUTS2Q8WXX7 1259 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 FAM149B1Q96BN6 582 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 CRTAC1Q9NQ79 661 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 TMEM161AQ9NX61 479 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 MRFAP1Q9Y605 127 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 VDRP11473 427 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 PTPN1P18031 435 aaKnown RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 RFC1P35251 1148 aaPredicted RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 CENPCQ03188 943 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 PDCLQ13371 301 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 OR10T2Q8NGX3 314 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 SYT15Q9BQS2 421 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 KRT82Q9NSB4 513 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 TMLHEQ9NVH6 421 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 CNTN6Q9UQ52 1028 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 SLU7O95391 586 aaKnown RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 RPLP2P05387 115 aaKnown RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 LRPAP1P30533 357 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 MAMLD1Q13495 774 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 C10orf76Q5T2E6 689 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 LIN9Q5TKA1 542 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 OVOS1Q6IE37 1185 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 NOA1Q8NC60 698 aaKnown RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 VWCEQ96DN2 955 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 PCED1BQ96HM7 432 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 FTHL17Q9BXU8 183 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 ABI2Q9NYB9 513 aaPredicted RBP14.07□□□□□ -0.16
ACER3-201ENST00000278544 PRKAG2Q9UGJ0 569 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 CDC23Q9UJX2 597 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 AMFRQ9UKV5 643 aa14.07□□□□□ -0.16
ACER3-201ENST00000278544 MED7O43513 233 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 PNPLA4P41247 253 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 GPD2P43304 727 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 SLC11A1P49279 550 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 INCA1Q0VD86 236 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 PRSS55Q6UWB4 352 aaPredicted RBP14.06□□□□□ -0.16
ACER3-201ENST00000278544 RSPH1Q8WYR4 309 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 SELENOOQ9BVL4 669 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 HEMGNQ9BXL5 484 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 VRTNQ9H8Y1 702 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 CXXC1Q9P0U4 656 aaPredicted RBP14.06□□□□□ -0.16
ACER3-201ENST00000278544 NUDT5Q9UKK9 219 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 MMP8P22894 467 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 OGDHQ02218 1023 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 C15orf59Q2T9L4 293 aaPredicted RBP14.06□□□□□ -0.16
ACER3-201ENST00000278544 FUKQ8N0W3 1084 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 TXLNBQ8N3L3 684 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 ALG3Q92685 438 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 CASD1Q96PB1 797 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 ZWILCHQ9H900 591 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 FAN1Q9Y2M0 1017 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 ALDH2P05091 517 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 PFKMP08237 780 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 CNGA2Q16280 664 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 TXNRD3NBQ6F5E7 133 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 CD300LGQ6UXG3 332 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 SPRED2Q7Z698 418 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 RNF10Q8N5U6 811 aaKnown RBP14.06□□□□□ -0.16
ACER3-201ENST00000278544 TTC9BQ8N6N2 239 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 DPF3Q92784 378 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 ZBED2Q9BTP6 218 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 SLC27A5Q9Y2P5 690 aa14.06□□□□□ -0.16
ACER3-201ENST00000278544 CHD9Q3L8U1 2897 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 EOMESO95936 686 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 EPHB4P54760 987 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 ZNF365Q70YC5 407 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 NT5DC3Q86UY8 548 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 ZNF677Q86XU0 584 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 KLHL7Q8IXQ5 586 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 ADAM32Q8TC27 787 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 BCL7CQ8WUZ0 217 aaPredicted RBP14.05□□□□□ -0.16
ACER3-201ENST00000278544 PCDHGC5Q9Y5F6 944 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 CAND2O75155 1236 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 AP1G2O75843 785 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 PAEPP09466 180 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 KRT3P12035 628 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 ATXN1P54253 815 aaKnown RBP14.05□□□□□ -0.16
ACER3-201ENST00000278544 YWHAHQ04917 246 aaPredicted RBP14.05□□□□□ -0.16
ACER3-201ENST00000278544 PKN2Q16513 984 aaKnown RBP14.05□□□□□ -0.16
ACER3-201ENST00000278544 SLC39A12Q504Y0 691 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 KAZNQ674X7 775 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 FAM183BPQ6ZVS7 135 aa14.05□□□□□ -0.16
ACER3-201ENST00000278544 CCDC50Q8IVM0 306 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms