RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TMEM35BQ8NCS4 154 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 FAM118BQ9BPY3 351 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 TMLHEQ9NVH6 421 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 ACRP10323 421 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 TRADDQ15628 312 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 PLEKHA7Q6IQ23 1121 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 DSTYKQ6XUX3 929 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 RHOT2Q8IXI1 618 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 FUKQ8N0W3 1084 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 ARFGAP1Q8N6T3 406 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 OR10T2Q8NGX3 314 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 TRIM43Q96BQ3 446 aaPredicted RBP12.39□□□□□ -0.43
SSRP1-201ENST00000278412 KCNK16Q96T55 309 aa12.39□□□□□ -0.43
SSRP1-201ENST00000278412 METTL5Q9NRN9 209 aaKnown RBP12.39□□□□□ -0.43
SSRP1-201ENST00000278412 DDX43Q9NXZ2 648 aaKnown RBP12.39□□□□□ -0.43
SSRP1-201ENST00000278412 PYGMP11217 842 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 VDRP11473 427 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 SV2CQ496J9 727 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 LRRTM3Q86VH5 581 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 GSPT2Q8IYD1 628 aaKnown RBP12.38□□□□□ -0.43
SSRP1-201ENST00000278412 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 SNX25Q9H3E2 840 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 ANKZF1Q9H8Y5 726 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 AMFRQ9UKV5 643 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 VWA8A3KMH1 1905 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 SPOPO43791 374 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 EN2P19622 333 aaPredicted RBP12.38□□□□□ -0.43
SSRP1-201ENST00000278412 CDH5P33151 784 aaPredicted RBP12.38□□□□□ -0.43
SSRP1-201ENST00000278412 OR1G1P47890 313 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 NDUFV1P49821 464 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 CNGA2Q16280 664 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 PKDCCQ504Y2 493 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 FAM183BPQ6ZVS7 135 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 ANKRD33Q7Z3H0 272 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
SSRP1-201ENST00000278412 CD101Q93033 1021 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 PI4K2BG5E9Z4 385 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 CSF2RAP15509 400 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
SSRP1-201ENST00000278412 GJA8P48165 433 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 PEX5P50542 639 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 FAM189BP81408 668 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 BFSP2Q13515 415 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 SPATA4Q8NEY3 305 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 PRUNE2Q8WUY3 3088 aa12.38□□□□□ -0.43
SSRP1-201ENST00000278412 CTAGE15A4D2H0 777 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 LCP1P13796 627 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 FLT3P36888 993 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 RAB27AP51159 221 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 YWHAEP62258 255 aaKnown RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TUSC3Q13454 348 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 C15orf59Q2T9L4 293 aaPredicted RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 SMTNL2Q2TAL5 461 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 NOMO2Q5JPE7 1267 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 KCNT1Q5JUK3 1230 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 PPP1R15BQ5SWA1 713 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 DNAJC24Q6P3W2 148 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 GLB1LQ6UWU2 654 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 CTAGE6Q86UF2 777 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 CTAGE4Q8IX94 777 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 UBXN4Q92575 508 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TMEM39AQ9NV64 488 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TSC2P49815 1807 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 GABRDO14764 452 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 XPOTO43592 962 aaKnown RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 MTA2O94776 668 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 FGGP02679 453 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
SSRP1-201ENST00000278412 ADCY2Q08462 1091 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TRIM72Q6ZMU5 477 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 KLHL7Q8IXQ5 586 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 COLGALT2Q8IYK4 626 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TXLNBQ8N3L3 684 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 C18orf8Q96DM3 657 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 LRRC1Q9BTT6 524 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 SLC38A7Q9NVC3 462 aa12.37□□□□□ -0.43
SSRP1-201ENST00000278412 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
SSRP1-201ENST00000278412 DCDC2CA8MYV0 355 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms