RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 KYAT1Q16773 422 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 ZNF423Q2M1K9 1284 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 RESP18Q5W5W9 173 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 JADE1Q6IE81 842 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 CNNM4Q6P4Q7 775 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 ANKS3Q6ZW76 656 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 RAB44Q7Z6P3 723 aaPredicted RBP13.29□□□□□ -0.28
MRPS28-201ENST00000276585 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 E2F7Q96AV8 911 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 DHX58Q96C10 678 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
MRPS28-201ENST00000276585 RPF1Q9H9Y2 349 aaKnown RBP13.29□□□□□ -0.28
MRPS28-201ENST00000276585 PANK4Q9NVE7 773 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 RCOR1Q9UKL0 485 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 AGO2Q9UKV8 859 aaKnown RBP13.29□□□□□ -0.28
MRPS28-201ENST00000276585 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
MRPS28-201ENST00000276585 OBSL1O75147 1896 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 ABLIM3O94929 683 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 GCNT3O95395 438 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 VNN2O95498 520 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
MRPS28-201ENST00000276585 GJA1P17302 382 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 CASP1P29466 404 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 MCM4P33991 863 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 EHHADHQ08426 723 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 ELMOD1Q8N336 334 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 CRELD1Q96HD1 420 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 FAM84AQ96KN4 292 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
MRPS28-201ENST00000276585 NUSAP1Q9BXS6 441 aaKnown RBP13.28□□□□□ -0.28
MRPS28-201ENST00000276585 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 TRPV4Q9HBA0 871 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 POLR3BQ9NW08 1133 aaPredicted RBP13.28□□□□□ -0.28
MRPS28-201ENST00000276585 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 INVSQ9Y283 1065 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 NUB1Q9Y5A7 615 aa13.28□□□□□ -0.28
MRPS28-201ENST00000276585 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 ARHGEF37A1IGU5 675 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 J3QKU1 62 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 TK2O00142 265 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 PRPF6O94906 941 aaKnown RBP13.27□□□□□ -0.29
MRPS28-201ENST00000276585 MYL4P12829 197 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 DHPSP49366 369 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-201ENST00000276585 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 TRIM61Q5EBN2 209 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 SCARA3Q6AZY7 606 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 ATL3Q6DD88 541 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 SLFN12LQ6IEE8 588 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 IQCEQ6IPM2 695 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 EPM2AIP1Q7L775 607 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-201ENST00000276585 PIP4P1Q86T03 277 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 CD302Q8IX05 232 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 HDDC3Q8N4P3 179 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 PIGKQ92643 395 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 ZFYVE19Q96K21 471 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 ACCSQ96QU6 501 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 TSPAN18Q96SJ8 248 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 TMEM209Q96SK2 561 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 CBWD1Q9BRT8 395 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 ASB7Q9H672 318 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 DERAQ9Y315 318 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 C2CD2Q9Y426 696 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 PTPRDP23468 1912 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 EML5Q05BV3 1969 aa13.27□□□□□ -0.29
MRPS28-201ENST00000276585 PIRO00625 290 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 POLR2DO15514 142 aaKnown RBP13.26□□□□□ -0.29
MRPS28-201ENST00000276585 ARHGAP6O43182 974 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 URB1O60287 2271 aaKnown RBP13.26□□□□□ -0.29
MRPS28-201ENST00000276585 SEC24AO95486 1093 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 SPTA1P02549 2419 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 ME1P48163 572 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 FAM193AP78312 1265 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 POU5F1Q01860 360 aaKnown RBP13.26□□□□□ -0.29
MRPS28-201ENST00000276585 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 ALCAMQ13740 583 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 TEAD2Q15562 447 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 C9orf57Q5W0N0 161 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 ZNF280DQ6N043 979 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 C11orf74Q86VG3 221 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 BRSK2Q8IWQ3 736 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 CCDC65Q8IXS2 484 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 BEST2Q8NFU1 509 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 ZNF461Q8TAF7 563 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 POMGNT1Q8WZA1 660 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 NUP205Q92621 2012 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 RSPRY1Q96DX4 576 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 SAAL1Q96ER3 474 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 C7orf25Q9BPX7 421 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
MRPS28-201ENST00000276585 TIMM13Q9Y5L4 95 aaPredicted RBP13.26□□□□□ -0.29
MRPS28-201ENST00000276585 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms