RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RALGAPA2Q2PPJ7 1873 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 H0YGN5 161 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 PPFIA2O75334 1257 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 RARBP10826 455 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 PRKCZQ05513 592 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 MTMR3Q13615 1198 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 ACAP1Q15027 740 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 PKDCCQ504Y2 493 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 FBXO47Q5MNV8 452 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 PPP1R26Q5T8A7 1209 aaPredicted RBP10.11□□□□□ -0.79
TRIM55-201ENST00000276573 TWF2Q6IBS0 349 aaKnown RBP10.11□□□□□ -0.79
TRIM55-201ENST00000276573 SPOCD1Q6ZMY3 1216 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 PAXIP1Q6ZW49 1069 aaPredicted RBP10.11□□□□□ -0.79
TRIM55-201ENST00000276573 TMC3Q7Z5M5 1100 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 OR6B3Q8NGW1 331 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 GRK7Q8WTQ7 553 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 ATG4AQ8WYN0 398 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 ARL8AQ96BM9 186 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 SLITRK1Q96PX8 696 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 MIS12Q9H081 205 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 FAM204AQ9H8W3 233 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 METTL5Q9NRN9 209 aaKnown RBP10.11□□□□□ -0.79
TRIM55-201ENST00000276573 GDAP2Q9NXN4 497 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.11□□□□□ -0.79
TRIM55-201ENST00000276573 PTPN22Q9Y2R2 807 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 NFS1Q9Y697 457 aa10.11□□□□□ -0.79
TRIM55-201ENST00000276573 KPNA7A9QM74 516 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 M0QZ92 97 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SPTLC1O15269 473 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 KRT1P04264 644 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 KRT10P13645 584 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 PTPN7P35236 360 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SOX4Q06945 474 aaPredicted RBP10.1□□□□□ -0.79
TRIM55-201ENST00000276573 DMTNQ08495 405 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 PPP1R7Q15435 360 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA7BQ2TAP0 167 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ZFYVE27Q5T4F4 411 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ARHGAP17Q68EM7 881 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 LIMS2Q7Z4I7 341 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 POLNQ7Z5Q5 900 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 RPAINQ86UA6 219 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 RSPH3Q86UC2 560 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SESTD1Q86VW0 696 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 CRYBG2Q8N1P7 616 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 EMC1Q8N766 993 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 FBXO25Q8TCJ0 367 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 RAPGEF5Q92565 580 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ART4Q93070 314 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SLC4A5Q9BY07 1137 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 KLHL11Q9NVR0 708 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 A8MXQ7 604 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ADAMTS4O75173 837 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 RPS6KA5O75582 802 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 TJP3O95049 919 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 KRT14P02533 472 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 CHRNA1P02708 482 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SETSIPP0DME0 302 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 IVDP26440 423 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SCN1AP35498 2009 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 GNL1P36915 607 aaPredicted RBP10.1□□□□□ -0.79
TRIM55-201ENST00000276573 PNPLA4P41247 253 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 CAP1Q01518 475 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SLC25A11Q02978 314 aaKnown RBP10.1□□□□□ -0.79
TRIM55-201ENST00000276573 KRT17Q04695 432 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ADCY2Q08462 1091 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 PTK6Q13882 451 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 HADHQ16836 314 aaKnown RBP10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ODF2Q5BJF6 829 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 FAM47CQ5HY64 1035 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SPDYCQ5MJ68 293 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 OR6B2Q6IFH4 312 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SERINC5Q86VE9 423 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 TTC30AQ86WT1 665 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 KLHDC9Q8NEP7 349 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 IPO4Q8TEX9 1081 aaKnown RBP10.1□□□□□ -0.79
TRIM55-201ENST00000276573 SLC35F5Q8WV83 523 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 UBLCP1Q8WVY7 318 aaPredicted RBP10.1□□□□□ -0.79
TRIM55-201ENST00000276573 WNT8BQ93098 351 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ZNF560Q96MR9 790 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 LPIN3Q9BQK8 851 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 FAM129AQ9BZQ8 928 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 ST3GAL5Q9UNP4 418 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 NEU2Q9Y3R4 380 aa10.1□□□□□ -0.79
TRIM55-201ENST00000276573 hCG_1818297A0A087WSY0 165 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA6CA6NDK9 693 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 C3orf70A6NLC5 250 aaPredicted RBP10.09□□□□□ -0.79
TRIM55-201ENST00000276573 E5RJQ4 531 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 PIK3R2O00459 728 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 PTGESO14684 152 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 LRCH4O75427 683 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 RNF8O76064 485 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 KRT7P08729 469 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 PDGFRBP09619 1106 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 GOLGA6DP0CG33 693 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 FGFR1P11362 822 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 ITIH2P19823 946 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 IL1R2P27930 398 aa10.09□□□□□ -0.79
TRIM55-201ENST00000276573 CCND3P30281 292 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms