RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ANXA9O76027 345 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ODC1P11926 461 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 PPP2R1BP30154 601 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 SLC39A10Q9ULF5 831 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 FGFR2P21802 821 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 RCOR2Q8IZ40 523 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 SMCO3A2RU48 225 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 TCHHL1Q5QJ38 904 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 CACHD1Q5VU97 1274 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 SNX31Q8N9S9 440 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 GORASP1Q9BQQ3 440 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 LXNQ9BS40 222 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 CEP44Q9C0F1 390 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 TIMMDC1Q9NPL8 285 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 AHSPQ9NZD4 102 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 KANSL1LA0AUZ9 987 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF806P0C7X5 589 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 SPRP35270 261 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 HIC1Q14526 733 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 CYP4Z1Q86W10 505 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 KCNK16Q96T55 309 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 RPS6KB2Q9UBS0 482 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ADORA2BP29275 332 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ARFIP2P53365 341 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 VSNL1P62760 191 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 ATP6V0D2Q8N8Y2 350 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 RFX7Q2KHR2 1363 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 MPOP05164 745 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 PRIM2P49643 509 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
PRDM16-201ENST00000270722 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
PRDM16-201ENST00000270722 NCF4Q15080 339 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 FRMD5Q7Z6J6 570 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF554Q86TJ5 538 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 GALNT6Q8NCL4 622 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SPRTNQ9H040 489 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 ADNPQ9H2P0 1102 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SLCO1A2P46721 670 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SHQ1Q6PI26 577 aaKnown RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 IL17RAQ96F46 866 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 LMBRD1Q9NUN5 540 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 FAM170AA1A519 330 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 F8W810 466 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RRM2P31350 389 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 LRRC41Q15345 812 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 CCDC60Q8IWA6 550 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 CHRAC1Q9NRG0 131 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 KLHL28Q9NXS3 571 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 CRLS1Q9UJA2 301 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RGS5O15539 181 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RBL2Q08999 1139 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RABL6Q3YEC7 729 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SWSAP1Q6NVH7 229 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 P3H2Q8IVL5 708 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 GPRC5AQ8NFJ5 357 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 TP53INP1Q96A56 240 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 MMADHCQ9H3L0 296 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RSL24D1Q9UHA3 163 aaKnown RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 PLA2G4CQ9UP65 541 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF335Q9H4Z2 1342 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SKAP2O75563 359 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RXRGP48443 463 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SLC45A4Q5BKX6 768 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SP8Q8IXZ3 490 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SPASTQ9UBP0 616 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 NDUFB9Q9Y6M9 179 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 EXOSC10Q01780 885 aaKnown RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 ABI2Q9NYB9 513 aaPredicted RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 PCDHB12Q9Y5F1 795 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
PRDM16-201ENST00000270722 FKBP9O95302 570 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 POLBP06746 335 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 GNA13Q14344 377 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 RGS21Q2M5E4 152 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF284Q2VY69 593 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 FKBP9P1Q75LS8 142 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 HS6ST3Q8IZP7 471 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 NT5C1AQ9BXI3 368 aa13.75□□□□□ -0.21
PRDM16-201ENST00000270722 ZMYND10O75800 440 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 KLHL18O94889 574 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 FBXO38Q6PIJ6 1188 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 MAGED4Q96JG8 741 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 SERPINB12Q96P63 405 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms