RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RNF10Q8N5U6 811 aaKnown RBP26.21■■□□□ 1.79
SSBP4-201ENST00000270061 C12orf76Q8N812 135 aaPredicted RBP26.21■■□□□ 1.79
SSBP4-201ENST00000270061 KHSRPQ92945 711 aaKnown RBP eCLIP26.21■■□□□ 1.79
SSBP4-201ENST00000270061 SECISBP2LQ93073 1101 aaKnown RBP26.21■■□□□ 1.79
SSBP4-201ENST00000270061 RPF1Q9H9Y2 349 aaKnown RBP26.21■■□□□ 1.79
SSBP4-201ENST00000270061 FNIP2Q9P278 1114 aa26.21■■□□□ 1.79
SSBP4-201ENST00000270061 ANK1P16157 1881 aa26.21■■□□□ 1.79
SSBP4-201ENST00000270061 CTAGE9A4FU28 777 aa26.2■■□□□ 1.79
SSBP4-201ENST00000270061 BTNL10A8MVZ5 291 aa26.2■■□□□ 1.79
SSBP4-201ENST00000270061 GLUD1P00367 558 aa26.2■■□□□ 1.79
SSBP4-201ENST00000270061 SMYD5Q6GMV2 418 aa26.2■■□□□ 1.79
SSBP4-201ENST00000270061 INTUQ9ULD6 942 aa26.2■■□□□ 1.79
SSBP4-201ENST00000270061 TRAPPC3O43617 180 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 URI1O94763 535 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-201ENST00000270061 TUBB2AQ13885 445 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 PRSS55Q6UWB4 352 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-201ENST00000270061 C18orf25Q96B23 403 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-201ENST00000270061 NECTIN4Q96NY8 510 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 NAPGQ99747 312 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-201ENST00000270061 PI4K2AQ9BTU6 479 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 TUBB2BQ9BVA1 445 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 SFXN1Q9H9B4 322 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 DPP7Q9UHL4 492 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 CDH22Q9UJ99 828 aa26.2■■□□□ 1.78
SSBP4-201ENST00000270061 UQCRHLA0A096LP55 91 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 UQCRHP07919 91 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 ELMSAN1Q6PJG2 1045 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 GLYCTKQ8IVS8 523 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 C3orf58Q8NDZ4 430 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 LNX1Q8TBB1 728 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-201ENST00000270061 PIK3R5Q8WYR1 880 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 FAM84AQ96KN4 292 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 RPGRIP1Q96KN7 1286 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 AGPAT1Q99943 283 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 MAN1C1Q9NR34 630 aa26.19■■□□□ 1.78
SSBP4-201ENST00000270061 PODXLO00592 558 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 RPL17P18621 184 aaKnown RBP26.18■■□□□ 1.78
SSBP4-201ENST00000270061 IGFBP6P24592 240 aaPredicted RBP26.18■■□□□ 1.78
SSBP4-201ENST00000270061 RPL9P32969 192 aaKnown RBP26.18■■□□□ 1.78
SSBP4-201ENST00000270061 NCOA4Q13772 614 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 TRAPPC11Q7Z392 1133 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 PALB2Q86YC2 1186 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 TRIM58Q8NG06 486 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 RIPOR3Q96MK2 946 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 PHACTR2O75167 634 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 TNFAIP3P21580 790 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 MTHFRP42898 656 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 PSMD5Q16401 504 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 TMC5Q6UXY8 1006 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 ASB7Q9H672 318 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 EPHX3Q9H6B9 360 aa26.18■■□□□ 1.78
SSBP4-201ENST00000270061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.18■■□□□ 1.785e-8■■■■■ 144.6
SSBP4-201ENST00000270061 MYO10Q9HD67 2058 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 LOC730098B7Z3J9 87 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 TACC1O75410 805 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 C1RP00736 705 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 WEE2P0C1S8 567 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 ATAT1Q5SQI0 421 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 CD300LGQ6UXG3 332 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 FAM212AQ96EL1 285 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 KIF12Q96FN5 646 aa26.17■■□□□ 1.78
SSBP4-201ENST00000270061 MACROD2A1Z1Q3 448 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 CTIFO43310 598 aaKnown RBP26.16■■□□□ 1.78
SSBP4-201ENST00000270061 FGFR3P22607 806 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 TBXAS1P24557 533 aaPredicted RBP26.16■■□□□ 1.78
SSBP4-201ENST00000270061 EFCAB13Q8IY85 973 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 ANKRD36BP1Q96IX9 119 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 MTMR12Q9C0I1 747 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 POMKQ9H5K3 350 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 APOBEC3GQ9HC16 384 aaKnown RBP26.16■■□□□ 1.78
SSBP4-201ENST00000270061 NUB1Q9Y5A7 615 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 MRFAP1Q9Y605 127 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 DENND4AQ7Z401 1863 aa26.16■■□□□ 1.78
SSBP4-201ENST00000270061 ANO9A1A5B4 782 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 LACTBL1A8MY62 500 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 PI4K2BG5E9Z4 385 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 TGM5O43548 720 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 SLU7O95391 586 aaKnown RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 ASS1P00966 412 aaKnown RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 BRCC3P46736 316 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 EPS8L1Q8TE68 723 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 C1QTNF1Q9BXJ1 281 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 IMPG2Q9BZV3 1241 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 TUBGCP4Q9UGJ1 667 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 NOCTQ9UK39 431 aaKnown RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 I3L4J1 428 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 CYP26A1O43174 497 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 CST3P01034 146 aaPredicted RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 TNNC2P02585 160 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 H2AFZP0C0S5 128 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 TMEM191BP0C7N4 346 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 SPATA31D3P0C874 917 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 ALADP13716 330 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 USP8P40818 1118 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 NOP14P78316 857 aaKnown RBP26.15■■□□□ 1.78
SSBP4-201ENST00000270061 CUL2Q13617 745 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 SGSM1Q2NKQ1 1148 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 SPATA31D4Q6ZUB0 917 aa26.15■■□□□ 1.78
SSBP4-201ENST00000270061 H2AFVQ71UI9 128 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms