RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TRIM33Q9UPN9 1127 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 EDF1O60869 148 aaKnown RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 TOM1L1O75674 476 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 HOXC6P09630 235 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 FGFR1P11362 822 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 EZRP15311 586 aaKnown RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 PROZP22891 400 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 IL1R2P27930 398 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 ASPAP45381 313 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 CNTN2Q02246 1040 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 ADCY1Q08828 1119 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 SPARCL1Q14515 664 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 SGSM1Q2NKQ1 1148 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 NAT8LQ8N9F0 302 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 FNIP1Q8TF40 1166 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 ACSF2Q96CM8 615 aaPredicted RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 TMEM121Q9BTD3 319 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 FRMD8P1Q9BZ68 369 aaPredicted RBP13.09□□□□□ -0.31
BEST3-201ENST00000266661 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 LHX5Q9H2C1 402 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 CYTH4Q9UIA0 394 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
BEST3-201ENST00000266661 IGKV6-21A0A0C4DH24 114 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 A0A1B0GUA9 196 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 FAM155AB1AL88 458 aaPredicted RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 NDC80O14777 642 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 OGTO15294 1046 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 ELF1P32519 619 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 RFC1P35251 1148 aaPredicted RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 VEGFBP49765 207 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 EFNA5P52803 228 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 GAD2Q05329 585 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PTPN20Q4JDL3 420 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 BBS12Q6ZW61 710 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 CENPUQ71F23 418 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 ERICH1Q86X53 443 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 KIF2BQ8N4N8 673 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 CHST13Q8NET6 341 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 CPT1BQ92523 772 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 STAMBPL1Q96FJ0 436 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 MAK16Q9BXY0 300 aaKnown RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 NRBP2Q9NSY0 501 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PHTF1Q9UMS5 762 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 LRRD1A4D1F6 860 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 A8MUI8 341 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 POC1B-GALNT4F8VUJ3 575 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 LRCH4O75427 683 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 WFS1O76024 890 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 T-ENOLP0DO92 83 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 MSH2P43246 934 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 GDF10P55107 478 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 FKBP1BP68106 108 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PDE4CQ08493 712 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PDIA2Q13087 525 aaKnown RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 DNAJC3Q13217 504 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 DUOXA2Q1HG44 320 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PARP6Q2NL67 630 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 SH3D19Q5HYK7 790 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 SPDYAQ5MJ70 313 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 ANKRD22Q5VYY1 191 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 FAM47EQ6ZV65 393 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 ZBED8Q8IZ13 594 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 JOSD2Q8TAC2 188 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 C10orf82Q8WW14 230 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
BEST3-201ENST00000266661 MYLK2Q9H1R3 596 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 SLCO1B3Q9NPD5 702 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 TJP2Q9UDY2 1190 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 AFG3L2Q9Y4W6 797 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 PPME1Q9Y570 386 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 CSADQ9Y600 493 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.32
BEST3-201ENST00000266661 ZBTB42B2RXF5 422 aa13.07□□□□□ -0.32
BEST3-201ENST00000266661 IRF6O14896 467 aa13.07□□□□□ -0.32
BEST3-201ENST00000266661 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
BEST3-201ENST00000266661 RPL22P35268 128 aaKnown RBP13.07□□□□□ -0.32
BEST3-201ENST00000266661 OTUD4Q01804 1114 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms