RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ELOVL4Q9GZR5 314 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 HSD3B7Q9H2F3 369 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 ACP6Q9NPH0 428 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 ZDHHC7Q9NXF8 308 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 PCDHB5Q9Y5E4 795 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 GREB1Q4ZG55 1949 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 F8VP50 259 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 XYLBO75191 536 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 RHOP08100 348 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 PTPN1P18031 435 aaKnown RBP7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 ALDH1A3P47895 512 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 KLK7P49862 253 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 CUL2Q13617 745 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 MAN2A1Q16706 1144 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 ARHGAP44Q17R89 818 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 TRIM65Q6PJ69 517 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 FAM114A1Q8IWE2 563 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 LMO3Q8TAP4 145 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 KHSRPQ92945 711 aaKnown RBP eCLIP7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 NT5C1BQ96P26 610 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 SMOC2Q9H3U7 446 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 SLITRK6Q9H5Y7 841 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 ZNF334Q9HCZ1 680 aaPredicted RBP7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 KRT82Q9NSB4 513 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 AJAP1Q9UKB5 411 aaPredicted RBP7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 CDH9Q9ULB4 789 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 COQ4Q9Y3A0 265 aa7.72□□□□□ -1.17
DEPDC1B-201ENST00000265036 TECTAO75443 2155 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 A0A1W2PRU2 124 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 CILPO75339 1184 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 CD19P15391 556 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 CEBPBP17676 345 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 PAX3P23760 479 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 GRIK1P39086 918 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 MTHFRP42898 656 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 CYP4F8P98187 520 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 TAF12Q16514 161 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 NFE2Q16621 373 aaPredicted RBP7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 CDKAL1Q5VV42 579 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 PHLDB3Q6NSJ2 640 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 TMEM270Q6UE05 265 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 FAM35AQ86V20 835 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 DHX40Q8IX18 779 aaKnown RBP7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 RNF214Q8ND24 703 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 MYCBPAPQ8TBZ2 947 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 SPPL2BQ8TCT7 592 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 WHAMMQ8TF30 809 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 TAF4BQ92750 862 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 MYADMQ96S97 322 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 KCNK16Q96T55 309 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 PHF7Q9BWX1 381 aaPredicted RBP7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 B3GNT5Q9BYG0 378 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 NDST4Q9H3R1 872 aa7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 WDR6Q9NNW5 1121 aaKnown RBP7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 MRPS23Q9Y3D9 190 aaKnown RBP7.71□□□□□ -1.17
DEPDC1B-201ENST00000265036 DENND4CQ5VZ89 1909 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 BEST1O76090 585 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 HNRNPA1P09651 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 KRT5P13647 590 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 CDK11BP21127 795 aaKnown RBP7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 USP8P40818 1118 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 INCA1Q0VD86 236 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 CETN1Q12798 172 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 EXOC3L4Q17RC7 722 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 VWA3BQ502W6 1294 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 IQCEQ6IPM2 695 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 FAM171BQ6P995 826 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 POTEHQ6S545 545 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 PDZD4Q76G19 769 aaPredicted RBP7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 FUKQ8N0W3 1084 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 ELMOD1Q8N336 334 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 CMASQ8NFW8 434 aaPredicted RBP7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 RSAD2Q8WXG1 361 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 KREMEN1Q96MU8 473 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 ASAH2Q9NR71 780 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 FAM50BQ9Y247 325 aa7.71□□□□□ -1.18
DEPDC1B-201ENST00000265036 ANAPC1Q9H1A4 1944 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 BECN2A8MW95 431 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 AP1G2O75843 785 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 PTMSP20962 102 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 FSHRP23945 695 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 GABRR2P28476 465 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 HOXA9P31269 272 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 EPHB3P54753 998 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 USP46P62068 366 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 ENPEPQ07075 957 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 UVSSAQ2YD98 709 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 CFAP221Q4G0U5 840 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 PPP1R26Q5T8A7 1209 aaPredicted RBP7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 GBP6Q6ZN66 633 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 C4orf50Q6ZRC1 276 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 DNAJB7Q7Z6W7 309 aaPredicted RBP7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 ADHFE1Q8IWW8 467 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 GJD3Q8N144 294 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 TDRD5Q8NAT2 981 aaKnown RBP7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 FGF13Q92913 245 aa7.7□□□□□ -1.18
DEPDC1B-201ENST00000265036 MCRS1Q96EZ8 462 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms