RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PSTPIP1O43586 416 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 PEX11AO75192 247 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 GJB6O95452 261 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 TRPC1P48995 793 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 ACTR2P61160 394 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 ZNF667Q5HYK9 610 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 ZNF720Q7Z2F6 126 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 NOP9Q86U38 636 aaKnown RBP15.72■□□□□ 0.11
CASC3-201ENST00000264645 CLVS1Q8IUQ0 354 aaPredicted RBP15.72■□□□□ 0.11
CASC3-201ENST00000264645 KIFC3Q9BVG8 833 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 KLHL25Q9H0H3 589 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 ORC6Q9Y5N6 252 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 RPTORQ8N122 1335 aa15.72■□□□□ 0.11
CASC3-201ENST00000264645 CCDC78A2IDD5 438 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ETS1P14921 441 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 VCAM1P19320 739 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 RPL5P46777 297 aaKnown RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 FAAP100Q0VG06 881 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 PIGHQ14442 188 aaPredicted RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 ADRM1Q16186 407 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ZNF699Q32M78 642 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 RFWD3Q6PCD5 774 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 SLC26A11Q86WA9 606 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 RNF135Q8IUD6 432 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 USP13Q92995 863 aaPredicted RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 CLPTM1LQ96KA5 538 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 AGO2Q9UKV8 859 aaKnown RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 CDY2AQ9Y6F7 541 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 CDY1Q9Y6F8 540 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 WASF2Q9Y6W5 498 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 CLRN2A0PK11 232 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 KRT75O95678 551 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 HLA-DRAP01903 254 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 HSPA13P48723 471 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 EIF2B2P49770 351 aaKnown RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 SERPINB9P50453 376 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 NCKAP1LP55160 1127 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ASTE1Q2TB18 679 aaPredicted RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 FASTKD1Q53R41 847 aaKnown RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 TNS3Q68CZ2 1445 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 TTC27Q6P3X3 843 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ZCCHC9Q8N567 271 aaKnown RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 ZSWIM2Q8NEG5 633 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 CDCA7Q9BWT1 371 aaPredicted RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 DBNDD1Q9H9R9 158 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 PIDD1Q9HB75 910 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 WDR35Q9P2L0 1181 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 TMCO1Q9UM00 188 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ZC3H4Q9UPT8 1303 aaKnown RBP15.71■□□□□ 0.11
CASC3-201ENST00000264645 C2orf71A6NGG8 1288 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 H0YGN5 161 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ELK3P41970 407 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 CYP4A22Q5TCH4 519 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 SLFN12LQ6IEE8 588 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ZBTB46Q86UZ6 589 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 EXD1Q8NHP7 514 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 RFWD2Q8NHY2 731 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 C10orf88Q9H8K7 445 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 NFS1Q9Y697 457 aa15.71■□□□□ 0.11
CASC3-201ENST00000264645 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 ITKQ08881 620 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 GRAPQ13588 217 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 SLC1A5Q15758 541 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 LPCAT4Q643R3 524 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 DHDDSQ86SQ9 333 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 GSTCDQ8NEC7 633 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 GRAPLQ8TC17 118 aaPredicted RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 C12orf65Q9H3J6 166 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 DHX35Q9H5Z1 703 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 LRRC19Q9H756 370 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 CYLDQ9NQC7 956 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 SHOC2Q9UQ13 582 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 DDX3YO15523 660 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 LINGO3P0C6S8 592 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 NUP107P57740 925 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 MRPS22P82650 360 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 BNC2Q6ZN30 1099 aaPredicted RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 AGAP3Q96P47 875 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 ATP9BO43861 1147 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 E2F6O75461 281 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 BANF1O75531 89 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 SDC4P31431 198 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 YWHABP31946 246 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 ANO4Q32M45 955 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 ALYREFQ86V81 257 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 ULK2Q8IYT8 1036 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 VGLL2Q8N8G2 317 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 USP6NLQ92738 828 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 ZFRQ96KR1 1074 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 TMEM79Q9BSE2 394 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 BFARQ9NZS9 450 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 WTIPA6NIX2 430 aaPredicted RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 DCXO43602 365 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 LDHAP00338 332 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 KPNA2P52292 529 aaKnown RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 HIRAP54198 1017 aaPredicted RBP15.7■□□□□ 0.1
CASC3-201ENST00000264645 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
CASC3-201ENST00000264645 MCPH1Q8NEM0 835 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms