RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 C17orf75Q9HAS0 396 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 CROCCQ5TZA2 2017 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 CYP27B1O15528 508 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 GAS2O43903 313 aaKnown RBP18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 PARVBQ9HBI1 364 aa18.16■□□□□ 0.5
NOTCH3-201ENST00000263388 MYMKA6NI61 221 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 SNTNA6NMZ2 147 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CAPZA2P47755 286 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 UNC45BQ8IWX7 931 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 SIKE1Q9BRV8 207 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 DTNAQ9Y4J8 743 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 TXNP10599 105 aaKnown RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 SBK1Q52WX2 424 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 ERGIC2Q96RQ1 377 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CRB1P82279 1406 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 TMEM253P0C7T8 217 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 MLNP12872 115 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 HSD17B3P37058 310 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CORO7P57737 925 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 LMBRD2Q68DH5 695 aaPredicted RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 IFNEQ86WN2 208 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 LRRC6Q86X45 466 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 TGM2P21980 687 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 HARS2P49590 506 aaKnown RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CACNB2Q08289 660 aaPredicted RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CNGA2Q16280 664 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CLEC16AQ2KHT3 1053 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 GPR63Q9BZJ6 419 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 ARHGEF3Q9NR81 526 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 SOX13Q9UN79 622 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 ANXA9O76027 345 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 DLGAP3O95886 979 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 MYBP10242 640 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 TARSP26639 723 aaKnown RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 ADRM1Q16186 407 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 TMEM143Q96AN5 459 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 FAM84BQ96KN1 310 aaPredicted RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 KRT84Q9NSB2 600 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 PPRC1Q5VV67 1664 aaKnown RBP18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 STRNO43815 780 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 NUDT2P50583 147 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 CNGB3Q9NQW8 809 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 ALG6Q9Y672 507 aa18.15■□□□□ 0.5
NOTCH3-201ENST00000263388 MAPK7Q13164 816 aa18.14■□□□□ 0.5
NOTCH3-201ENST00000263388 HPDLQ96IR7 371 aa18.14■□□□□ 0.5
NOTCH3-201ENST00000263388 TKFCQ3LXA3 575 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 FAM9CQ8IZT9 166 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 ENO4A6NNW6 628 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 E7ENQ6 273 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 USP1O94782 785 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 PDHBP11177 359 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 CYP19A1P11511 503 aaPredicted RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 RGS7P49802 495 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 TRIM28Q13263 835 aaKnown RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 BFSP2Q13515 415 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 NOTUMQ6P988 496 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 NAT9Q9BTE0 207 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 MOV10L1Q9BXT6 1211 aaKnown RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 NDUFA13Q9P0J0 144 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 ZNF839A8K0R7 811 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 PGK2P07205 417 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 DLGAP2Q9P1A6 1054 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 KANSL1LA0AUZ9 987 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 RNF103O00237 685 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 PABPC3Q9H361 631 aaKnown RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 TRIM13O60858 407 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 EMC2Q15006 297 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 ARHGAP17Q68EM7 881 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 GTF3C2Q8WUA4 911 aaPredicted RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 ZNF668Q96K58 619 aaPredicted RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 SOAT2O75908 522 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 MYCP01106 439 aaPredicted RBP18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 PDGFRBP09619 1106 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 PTGER2P43116 358 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 ATF7IP2Q5U623 682 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 CACHD1Q5VU97 1274 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 OTUD5Q96G74 571 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 BBS2Q9BXC9 721 aa18.14■□□□□ 0.49
NOTCH3-201ENST00000263388 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 SLC2A3P11169 496 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 AKR1B1P15121 316 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 COILP38432 576 aaPredicted RBP18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 XRRA1Q6P2D8 792 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 GPR141Q7Z602 305 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 SRPK1Q96SB4 655 aaKnown RBP18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 MKL2Q9ULH7 1088 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ZBTB39O15060 712 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 PSMC3P17980 439 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 STIP1P31948 543 aaKnown RBP18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 SERPINB8P50452 374 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ERFP50548 548 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 TTLL9Q3SXZ7 439 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 STRIP1Q5VSL9 837 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 GPAT2Q6NUI2 795 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 KIF2BQ8N4N8 673 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ZNF512Q96ME7 567 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms