RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 KRT16P08779 473 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 GPD1P21695 349 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 GSSP48637 474 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 BAATQ14032 418 aaPredicted RBP12.54□□□□□ -0.4
SMG6-201ENST00000263073 WDR48Q8TAF3 677 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 ASAP3Q8TDY4 903 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 MASTLQ96GX5 879 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 CDY2AQ9Y6F7 541 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 CDY1Q9Y6F8 540 aa12.54□□□□□ -0.4
SMG6-201ENST00000263073 AKT1P31749 480 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 COG2Q14746 738 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ATP8B4Q8TF62 1192 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CEP41Q9BYV8 373 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 TMEM51Q9NW97 253 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 SPTLC1O15269 473 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 KCNQ2O43526 872 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ASMTLO95671 621 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CLPTM1O96005 669 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CENPCQ03188 943 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 GRB10Q13322 594 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
SMG6-201ENST00000263073 TMEM132DQ14C87 1099 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 SLC47A2Q86VL8 602 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CHSY1Q86X52 802 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ERGIC2Q96RQ1 377 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ECSITQ9BQ95 431 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ROGDIQ9GZN7 287 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ARHGAP20Q9P2F6 1191 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 BLOC1S6Q9UL45 172 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ARHGEF40Q8TER5 1519 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 F8W8V4 182 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 AP1G2O75843 785 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 SUPT7LO94864 414 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 HSMCR30P0CW71 290 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CHRM3P20309 590 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 TTLL4Q14679 1199 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ZNF571Q7Z3V5 609 aaPredicted RBP12.53□□□□□ -0.4
SMG6-201ENST00000263073 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ZNF212Q9UDV6 495 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 NR5A2O00482 541 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ATP6V1B2P21281 511 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 EMC2Q15006 297 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ZRANB3Q5FWF4 1079 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CTNNAL1Q9UBT7 734 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
SMG6-201ENST00000263073 SYTL3Q4VX76 610 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 SPATA2LQ8IUW3 424 aaPredicted RBP12.53□□□□□ -0.4
SMG6-201ENST00000263073 SLC44A2Q8IWA5 706 aaPredicted RBP12.53□□□□□ -0.4
SMG6-201ENST00000263073 CATSPER2Q96P56 530 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 FUCA2Q9BTY2 467 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
SMG6-201ENST00000263073 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 SNUPNO95149 360 aaKnown RBP12.52□□□□□ -0.4
SMG6-201ENST00000263073 NDUFB10O96000 172 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 DEFA1P59665 94 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 DEFA3P59666 94 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 HS6ST3Q8IZP7 471 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 OR8H2Q8N162 312 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 ZSCAN18Q8TBC5 510 aaPredicted RBP12.52□□□□□ -0.4
SMG6-201ENST00000263073 TMEM79Q9BSE2 394 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 IARS2Q9NSE4 1012 aaKnown RBP12.52□□□□□ -0.4
SMG6-201ENST00000263073 CLCA2Q9UQC9 943 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 PSMA4P25789 261 aaKnown RBP12.52□□□□□ -0.4
SMG6-201ENST00000263073 PTGER2P43116 358 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 TWF1Q12792 350 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 TRADDQ15628 312 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 PAPD7Q5XG87 772 aaKnown RBP12.52□□□□□ -0.4
SMG6-201ENST00000263073 PDPK2PQ6A1A2 396 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 TRIM65Q6PJ69 517 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 SEMA6AQ9H2E6 1030 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 ACAD9Q9H845 621 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 TMEM8AQ9HCN3 771 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 ZNF446Q9NWS9 450 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.4
SMG6-201ENST00000263073 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.4
SMG6-201ENST00000263073 OPLAHO14841 1288 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 STRNO43815 780 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 GRK2P25098 689 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 PRKCEQ02156 737 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 SGSM1Q2NKQ1 1148 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 TSEN2Q8NCE0 465 aaKnown RBP12.52□□□□□ -0.41
SMG6-201ENST00000263073 TMEM245Q9H330 911 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 MCM8Q9UJA3 840 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
SMG6-201ENST00000263073 MED24O75448 989 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 RHOBTB1O94844 696 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 TGM2P21980 687 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 FGFR3P22607 806 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 SUGP1Q8IWZ8 645 aaKnown RBP12.52□□□□□ -0.41
SMG6-201ENST00000263073 SEPT3Q9UH03 358 aa12.52□□□□□ -0.41
SMG6-201ENST00000263073 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms