RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SH3PXD2AQ5TCZ1 1133 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 SNX27Q96L92 541 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 SH3GL2Q99962 352 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 SAE1Q9UBE0 346 aaPredicted RBP14.32□□□□□ -0.12
VMP1-201ENST00000262291 ASIC3Q9UHC3 531 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 PCYOX1Q9UHG3 505 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 RASAL2Q9UJF2 1139 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 FAM187AA6NFU0 413 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 ECEL1O95672 775 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 SLC10A3P09131 477 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 YARSP54577 528 aaKnown RBP14.32□□□□□ -0.12
VMP1-201ENST00000262291 KIRREL3Q8IZU9 778 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 ARFGAP1Q8N6T3 406 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 ARRDC4Q8NCT1 418 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 WNT8BQ93098 351 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 CABS1Q96KC9 395 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 OSBPL7Q9BZF2 842 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 DCLK3Q9C098 648 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.32□□□□□ -0.12
VMP1-201ENST00000262291 C2CD2Q9Y426 696 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 LRRD1A4D1F6 860 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 FAM155AB1AL88 458 aaPredicted RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 MED7O43513 233 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 NEBLO76041 1014 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 HSPA6P17066 643 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 ACTN3Q08043 901 aaPredicted RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 DCAF4L1Q3SXM0 396 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 PPP1R15BQ5SWA1 713 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 B4GALNT4Q76KP1 1039 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 XYLT1Q86Y38 959 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 EGFL6Q8IUX8 553 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 MREGQ8N565 214 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 OR6B3Q8NGW1 331 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 TSPAN16Q9UKR8 245 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 OPA1O60313 960 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 SHBGP04278 402 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 IL1R2P27930 398 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 ADAM17P78536 824 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 SOX4Q06945 474 aaPredicted RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 NFX1Q12986 1120 aaKnown RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 PDCLQ13371 301 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 CYP1B1Q16678 543 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 GOLGA7BQ2TAP0 167 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 ODF2Q5BJF6 829 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 PPP1R26Q5T8A7 1209 aaPredicted RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 CYP4F22Q6NT55 531 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 C3orf20Q8ND61 904 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 TRIB2Q92519 343 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 ZFP42Q96MM3 310 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 PLVAPQ9BX97 442 aa14.31□□□□□ -0.12
VMP1-201ENST00000262291 BARX2Q9UMQ3 279 aaPredicted RBP14.31□□□□□ -0.12
VMP1-201ENST00000262291 HAS3O00219 553 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 SPTLC1O15269 473 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 PSTPIP1O43586 416 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 PAEPP09466 180 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 P4HA1P13674 534 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 ETS1P14921 441 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 ATICP31939 592 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 CDH5P33151 784 aaPredicted RBP14.3□□□□□ -0.12
VMP1-201ENST00000262291 CDO1Q16878 200 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 FAM102AQ5T9C2 384 aaPredicted RBP14.3□□□□□ -0.12
VMP1-201ENST00000262291 OR6B2Q6IFH4 312 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 TAB3Q8N5C8 712 aaPredicted RBP14.3□□□□□ -0.12
VMP1-201ENST00000262291 GLIS1Q8NBF1 620 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 CAPS2Q9BXY5 557 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 E5RJQ4 531 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 CD48P09326 243 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 ZSCAN5DPP0CG00 497 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 ELF1P32519 619 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 HPDP32754 393 aaPredicted RBP14.3□□□□□ -0.12
VMP1-201ENST00000262291 GPD2P43304 727 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 AFF1P51825 1210 aaKnown RBP14.3□□□□□ -0.12
VMP1-201ENST00000262291 ZNF844Q08AG5 666 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 MYO1EQ12965 1108 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 UBXN11Q5T124 520 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 TWF2Q6IBS0 349 aaKnown RBP14.3□□□□□ -0.12
VMP1-201ENST00000262291 KATNAL2Q8IYT4 538 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 SLITRK1Q96PX8 696 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 ZNF518BQ9C0D4 1074 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 LRRC19Q9H756 370 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 TRPM7Q96QT4 1865 aa14.3□□□□□ -0.12
VMP1-201ENST00000262291 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 SMIM28A0A1B0GU29 152 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 H0YGN5 161 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
VMP1-201ENST00000262291 LMO2P25791 158 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 RDXP35241 583 aaKnown RBP14.29□□□□□ -0.12
VMP1-201ENST00000262291 FLT3LGP49771 235 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 CLUL1Q15846 466 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 PPP2R5EQ16537 467 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 C15orf59Q2T9L4 293 aaPredicted RBP14.29□□□□□ -0.12
VMP1-201ENST00000262291 NBPF20Q3BBV1 942 aa14.29□□□□□ -0.12
VMP1-201ENST00000262291 HSPH1Q92598 858 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms