RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CHST7Q9NS84 486 aa29.17■■■□□ 2.26
SMARCD3-201ENST00000262188 TNFAIP3P21580 790 aa29.16■■■□□ 2.26
SMARCD3-201ENST00000262188 SGO2Q562F6 1265 aa29.16■■■□□ 2.26
SMARCD3-201ENST00000262188 KIAA1841Q6NSI8 718 aa29.16■■■□□ 2.26
SMARCD3-201ENST00000262188 DENND1BQ6P3S1 775 aa29.16■■■□□ 2.26
SMARCD3-201ENST00000262188 THEM5Q8N1Q8 247 aa29.16■■■□□ 2.26
SMARCD3-201ENST00000262188 ACRBPQ8NEB7 543 aa29.16■■■□□ 2.26
SMARCD3-201ENST00000262188 O00370 1275 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 AKR1B10O60218 316 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 FAM163BP0C2L3 166 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 VDRP11473 427 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 DNAJB1P25685 340 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 UBA3Q8TBC4 463 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 SLC2A14Q8TDB8 520 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 CYFIP2Q96F07 1278 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 ACBD6Q9BR61 282 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 FAM124BQ9H5Z6 455 aaPredicted RBP29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 CDH9Q9ULB4 789 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 PCDHGC5Q9Y5F6 944 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 BZW2Q9Y6E2 419 aaKnown RBP29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 ARHGEF37A1IGU5 675 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 PCSK1P29120 753 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 GOLGA7BQ2TAP0 167 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 INTS6LQ5JSJ4 861 aaKnown RBP29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 TNIP3Q96KP6 325 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 PRO3102Q9H379 93 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 TSPAN16Q9UKR8 245 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 TFR2Q9UP52 801 aa29.15■■■□□ 2.26
SMARCD3-201ENST00000262188 SSU72P8A0A1W2PR75 194 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 MICAL2O94851 1124 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 KRT17Q04695 432 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 FMNL3Q8IVF7 1028 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 PCED1BQ96HM7 432 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 PKMYT1Q99640 499 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 HERC2P3Q9BVR0 1158 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 B3GNT5Q9BYG0 378 aa29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 EPN1Q9Y6I3 576 aaPredicted RBP29.14■■■□□ 2.26
SMARCD3-201ENST00000262188 A0A0U1RQJ8 604 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 CA8P35219 290 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 PSMD5Q16401 504 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 SLC39A12Q504Y0 691 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 ZNF280DQ6N043 979 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 PAQR9Q6ZVX9 377 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 FUKQ8N0W3 1084 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 SLC30A5Q8TAD4 765 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 ATRIPQ8WXE1 791 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 PGLYRP2Q96PD5 576 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 NDUFA10O95299 355 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 GLUD2P49448 558 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 PLCB3Q01970 1234 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 TTC30AQ86WT1 665 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 MYLPFQ96A32 169 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 REXO2Q9Y3B8 237 aaKnown RBP29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 CDY1Q9Y6F8 540 aa29.13■■■□□ 2.25
SMARCD3-201ENST00000262188 M0QYV0 167 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 ARHGAP6O43182 974 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 ERVFC1P60507 584 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 DSG1Q02413 1049 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 CPA5Q8WXQ8 436 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 TGS1Q96RS0 853 aaKnown RBP29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 ZNF518BQ9C0D4 1074 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 GRM6O15303 877 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 TBC1D4O60343 1298 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 CACNA2D1P54289 1103 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 TSPY1Q01534 308 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 C2CD6Q53TS8 623 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 NAA35Q5VZE5 725 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 ANKS3Q6ZW76 656 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 WDTC1Q8N5D0 677 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 C1orf131Q8NDD1 294 aaKnown RBP29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 MYCBPAPQ8TBZ2 947 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 SPATA18Q8TC71 538 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 SPPL3Q8TCT6 385 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 PIK3R5Q8WYR1 880 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 MED10Q9BTT4 135 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 ZCWPW1Q9H0M4 648 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 ZBP1Q9H171 429 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 TMEM30AQ9NV96 361 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 CYTH4Q9UIA0 394 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 MSRAQ9UJ68 235 aa29.12■■■□□ 2.25
SMARCD3-201ENST00000262188 CNGA2Q16280 664 aa29.11■■■□□ 2.25
SMARCD3-201ENST00000262188 SLC18A3Q16572 532 aa29.11■■■□□ 2.25
SMARCD3-201ENST00000262188 PPP2R2DQ66LE6 453 aa29.11■■■□□ 2.25
SMARCD3-201ENST00000262188 FAM171BQ6P995 826 aa29.11■■■□□ 2.25
SMARCD3-201ENST00000262188 POF1BQ8WVV4 589 aa29.11■■■□□ 2.25
SMARCD3-201ENST00000262188 URODP06132 367 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 ZNF677Q86XU0 584 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 FBXO22Q8NEZ5 403 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 CLSTN3Q9BQT9 956 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 PACSIN1Q9BY11 444 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 MTRRQ9UBK8 725 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 NAGPAQ9UK23 515 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 V9GYY5 206 aaPredicted RBP29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 BEST1O76090 585 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 CPB1P15086 417 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 LCLAT1Q6UWP7 414 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 CCDC170Q8IYT3 715 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 ARNTL2Q8WYA1 636 aa29.1■■■□□ 2.25
SMARCD3-201ENST00000262188 KIAA1257Q9ULG3 409 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms