RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SLC13A1Q9BZW2 595 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 GTF3C4Q9UKN8 822 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 BTBD3Q9Y2F9 522 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 AP3M1Q9Y2T2 418 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 TRIM17Q9Y577 477 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 FAM153BP0C7A2 387 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ME2P23368 584 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 SPRP35270 261 aaPredicted RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 FOLH1Q04609 750 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 FAM153CQ494X1 144 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 SCARA3Q6AZY7 606 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 DPH6Q7L8W6 267 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 TTC30AQ86WT1 665 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 P3H2Q8IVL5 708 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 SAMD3Q8N6K7 520 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ALLCQ8N6M5 410 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 DEPTORQ8TB45 409 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 FBXO25Q8TCJ0 367 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ZNF75CPQ92670 426 aaPredicted RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 EFHD2Q96C19 240 aaPredicted RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 ZNF333Q96JL9 665 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 LACRTQ9GZZ8 138 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 RPRD1BQ9NQG5 326 aaKnown RBP8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
SNCAIP-201ENST00000261367 C15orf38-AP3S2A0A0A6YYH1 394 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 USP17L21D6R901 530 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 MTSS1O43312 755 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 SNAPC5O75971 98 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 UFL1O94874 794 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ASLP04424 464 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 PTGS2P35354 604 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TRAF2Q12933 501 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TRAF3Q13114 568 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TRIM25Q14258 630 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 SLFN12LQ6IEE8 588 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ABRAXAS1Q6UWZ7 409 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ARPINQ7Z6K5 226 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ERO1BQ86YB8 467 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 CMTR1Q8N1G2 835 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ANO3Q9BYT9 981 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 RHOBTB2Q9BYZ6 727 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TMEM245Q9H330 911 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 KLHL31Q9H511 634 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 SMARCAL1Q9NZC9 954 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 GRIN2DO15399 1336 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ADGRA2Q96PE1 1338 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 HEATR9A2RTY3 570 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TNPO2O14787 897 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 GNPATO15228 680 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ATP2B4P23634 1241 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 HADHAP40939 763 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 HPCAP84074 193 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 PIGHQ14442 188 aaPredicted RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 CCNG2Q16589 344 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 DEPDC1Q5TB30 811 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ITPRIPL1Q6GPH6 555 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 C3orf62Q6ZUJ4 267 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 NLRX1Q86UT6 975 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 CCDC60Q8IWA6 550 aaPredicted RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 PDCD6IPQ8WUM4 868 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 RNF34Q969K3 372 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TSPAN17Q96FV3 270 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 C9orf72Q96LT7 481 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 BDH2Q9BUT1 245 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 KCND2Q9NZV8 630 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 KLHL3Q9UH77 587 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 LNPEPQ9UIQ6 1025 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 MRPL11Q9Y3B7 192 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 HEG1Q9ULI3 1381 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 H7C0S8 307 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 EFCAB14O75071 495 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TGDSO95455 350 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ABCB1P08183 1280 aaPredicted RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 SERPINH1P50454 418 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TCIRG1Q13488 830 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 PROSER3Q2NL68 480 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 EMC10Q5UCC4 262 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 PDPK2PQ6A1A2 396 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 KSR1Q8IVT5 923 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 FAM20AQ96MK3 541 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 CALN1Q9BXU9 219 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 AGXT2Q9BYV1 514 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 MAGEB5Q9BZ81 275 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 TRIM8Q9BZR9 551 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 BFARQ9NZS9 450 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ZC3H7BQ9UGR2 993 aaKnown RBP8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 ATP8B3O60423 1300 aa8.65□□□□□ -1.02
SNCAIP-201ENST00000261367 DNM1LO00429 736 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 CLOCKO15516 846 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 ATP9BO43861 1147 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 GZMAP12544 262 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 ITGA1P56199 1179 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 ITGA7Q13683 1181 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 MDH1BQ5I0G3 518 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 MZT2BQ6NZ67 158 aa8.65□□□□□ -1.03
SNCAIP-201ENST00000261367 SFRP1Q8N474 314 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms